Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC13P31276 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC13P31276 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HOXC13P31276 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXC13P31276 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXC13P31276 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXC13P31276 MFAP1P1-201ENST00000442257 1255 ntBASIC19.73■□□□□ 0.75
HOXC13P31276 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXC13P31276 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXC13P31276 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.73■□□□□ 0.75
HOXC13P31276 AC011558.1-201ENST00000623459 338 ntBASIC19.73■□□□□ 0.75
HOXC13P31276 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXC13P31276 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC13P31276 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXC13P31276 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC13P31276 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC13P31276 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXC13P31276 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC13P31276 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXC13P31276 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC13P31276 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC13P31276 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC13P31276 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC13P31276 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXC13P31276 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC13P31276 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC13P31276 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC13P31276 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HOXC13P31276 KRT8P11-201ENST00000409686 1436 ntBASIC19.72■□□□□ 0.75
HOXC13P31276 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXC13P31276 AC128688.1-201ENST00000487626 519 ntBASIC19.72■□□□□ 0.75
HOXC13P31276 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.72■□□□□ 0.75
HOXC13P31276 AC091076.1-201ENST00000610741 619 ntBASIC19.72■□□□□ 0.75
HOXC13P31276 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXC13P31276 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC13P31276 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC13P31276 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HOXC13P31276 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC13P31276 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXC13P31276 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HOXC13P31276 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXC13P31276 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXC13P31276 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC13P31276 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC13P31276 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC13P31276 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC13P31276 RNF152P1-201ENST00000397754 604 ntBASIC19.71■□□□□ 0.75
HOXC13P31276 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HOXC13P31276 HMGA1P5-201ENST00000412453 271 ntBASIC19.71■□□□□ 0.75
HOXC13P31276 AC007663.1-201ENST00000438948 1240 ntBASIC19.71■□□□□ 0.75
HOXC13P31276 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXC13P31276 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXC13P31276 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXC13P31276 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC13P31276 PRSS44-201ENST00000515154 1146 ntBASIC19.71■□□□□ 0.75
HOXC13P31276 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXC13P31276 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXC13P31276 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.71■□□□□ 0.75
HOXC13P31276 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXC13P31276 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC13P31276 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXC13P31276 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXC13P31276 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HOXC13P31276 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
HOXC13P31276 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC13P31276 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HOXC13P31276 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HOXC13P31276 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC13P31276 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC13P31276 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.7■□□□□ 0.74
HOXC13P31276 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC13P31276 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
HOXC13P31276 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXC13P31276 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXC13P31276 TSPY5P-201ENST00000426936 936 ntBASIC19.7■□□□□ 0.74
HOXC13P31276 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC13P31276 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.7■□□□□ 0.74
HOXC13P31276 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
HOXC13P31276 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC13P31276 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC13P31276 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HOXC13P31276 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC13P31276 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC13P31276 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC13P31276 AC096733.2-201ENST00000609937 1394 ntBASIC19.7■□□□□ 0.74
HOXC13P31276 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HOXC13P31276 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXC13P31276 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC13P31276 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXC13P31276 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC13P31276 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXC13P31276 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.69■□□□□ 0.74
HOXC13P31276 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HOXC13P31276 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
HOXC13P31276 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC13P31276 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC13P31276 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXC13P31276 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
HOXC13P31276 FAM207BP-201ENST00000447172 505 ntBASIC19.69■□□□□ 0.74
HOXC13P31276 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms