Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.63■□□□□ 0.57
SDHBP21912 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.63■□□□□ 0.57
SDHBP21912 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SDHBP21912 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.63■□□□□ 0.57
SDHBP21912 AC005104.2-201ENST00000427818 678 ntBASIC18.63■□□□□ 0.57
SDHBP21912 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.63■□□□□ 0.57
SDHBP21912 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.63■□□□□ 0.57
SDHBP21912 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.63■□□□□ 0.57
SDHBP21912 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHBP21912 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHBP21912 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.63■□□□□ 0.57
SDHBP21912 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHBP21912 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.63■□□□□ 0.57
SDHBP21912 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SDHBP21912 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.62■□□□□ 0.57
SDHBP21912 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHBP21912 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHBP21912 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.62■□□□□ 0.57
SDHBP21912 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.62■□□□□ 0.57
SDHBP21912 TOB2P1-201ENST00000469761 992 ntBASIC18.62■□□□□ 0.57
SDHBP21912 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SDHBP21912 AL139424.1-201ENST00000607572 797 ntBASIC18.62■□□□□ 0.57
SDHBP21912 AL773604.1-201ENST00000617417 272 ntBASIC18.62■□□□□ 0.57
SDHBP21912 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.62■□□□□ 0.57
SDHBP21912 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SDHBP21912 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SDHBP21912 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHBP21912 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.62■□□□□ 0.57
SDHBP21912 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.62■□□□□ 0.57
SDHBP21912 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHBP21912 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.62■□□□□ 0.57
SDHBP21912 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SDHBP21912 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHBP21912 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHBP21912 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHBP21912 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHBP21912 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHBP21912 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHBP21912 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHBP21912 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHBP21912 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SDHBP21912 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHBP21912 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SDHBP21912 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SDHBP21912 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SDHBP21912 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHBP21912 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SDHBP21912 SAPCD2P3-201ENST00000455031 850 ntBASIC18.61■□□□□ 0.57
SDHBP21912 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHBP21912 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SDHBP21912 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.61■□□□□ 0.57
SDHBP21912 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.61■□□□□ 0.57
SDHBP21912 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.61■□□□□ 0.57
SDHBP21912 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SDHBP21912 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SDHBP21912 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHBP21912 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHBP21912 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHBP21912 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SDHBP21912 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SDHBP21912 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHBP21912 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.6■□□□□ 0.57
SDHBP21912 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.6■□□□□ 0.57
SDHBP21912 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SDHBP21912 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.6■□□□□ 0.57
SDHBP21912 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 PMS2P2-201ENST00000425039 1128 ntBASIC18.6■□□□□ 0.57
SDHBP21912 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.6■□□□□ 0.57
SDHBP21912 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SDHBP21912 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SDHBP21912 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.6■□□□□ 0.57
SDHBP21912 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.6■□□□□ 0.57
SDHBP21912 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SDHBP21912 AL691403.2-201ENST00000618460 490 ntBASIC18.6■□□□□ 0.57
SDHBP21912 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SDHBP21912 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
SDHBP21912 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHBP21912 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHBP21912 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SDHBP21912 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHBP21912 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHBP21912 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.59■□□□□ 0.57
SDHBP21912 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHBP21912 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SDHBP21912 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SDHBP21912 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.59■□□□□ 0.57
SDHBP21912 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms