Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.19■□□□□ 0.98
SMPD1P17405 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.19■□□□□ 0.98
SMPD1P17405 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.19■□□□□ 0.98
SMPD1P17405 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.19■□□□□ 0.98
SMPD1P17405 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.19■□□□□ 0.98
SMPD1P17405 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.19■□□□□ 0.98
SMPD1P17405 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.19■□□□□ 0.98
SMPD1P17405 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.19■□□□□ 0.98
SMPD1P17405 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.19■□□□□ 0.98
SMPD1P17405 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.19■□□□□ 0.98
SMPD1P17405 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.19■□□□□ 0.98
SMPD1P17405 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SMPD1P17405 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMPD1P17405 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SMPD1P17405 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SMPD1P17405 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SMPD1P17405 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.18■□□□□ 0.98
SMPD1P17405 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.18■□□□□ 0.98
SMPD1P17405 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.18■□□□□ 0.98
SMPD1P17405 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.18■□□□□ 0.98
SMPD1P17405 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.18■□□□□ 0.98
SMPD1P17405 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.18■□□□□ 0.98
SMPD1P17405 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.18■□□□□ 0.98
SMPD1P17405 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 AC016734.2-201ENST00000624325 1377 ntBASIC21.18■□□□□ 0.98
SMPD1P17405 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SMPD1P17405 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SMPD1P17405 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.18■□□□□ 0.98
SMPD1P17405 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMPD1P17405 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
SMPD1P17405 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD1P17405 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD1P17405 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD1P17405 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD1P17405 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.17■□□□□ 0.98
SMPD1P17405 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD1P17405 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.17■□□□□ 0.98
SMPD1P17405 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.17■□□□□ 0.98
SMPD1P17405 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD1P17405 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD1P17405 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD1P17405 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD1P17405 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD1P17405 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.17■□□□□ 0.98
SMPD1P17405 TSSC2-201ENST00000450217 709 ntBASIC21.17■□□□□ 0.98
SMPD1P17405 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
SMPD1P17405 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.17■□□□□ 0.98
SMPD1P17405 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
SMPD1P17405 MIR3180-1-201ENST00000580374 94 ntBASIC21.17■□□□□ 0.98
SMPD1P17405 MIR3180-3-201ENST00000584616 94 ntBASIC21.17■□□□□ 0.98
SMPD1P17405 AC092329.2-201ENST00000598402 547 ntBASIC21.17■□□□□ 0.98
SMPD1P17405 AL157888.1-201ENST00000631930 593 ntBASIC21.17■□□□□ 0.98
SMPD1P17405 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.17■□□□□ 0.98
SMPD1P17405 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.17■□□□□ 0.98
SMPD1P17405 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD1P17405 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SMPD1P17405 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.17■□□□□ 0.98
SMPD1P17405 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD1P17405 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMPD1P17405 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.17■□□□□ 0.98
SMPD1P17405 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.16■□□□□ 0.98
SMPD1P17405 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMPD1P17405 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMPD1P17405 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.16■□□□□ 0.98
SMPD1P17405 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMPD1P17405 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.16■□□□□ 0.98
SMPD1P17405 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SMPD1P17405 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.16■□□□□ 0.98
SMPD1P17405 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.16■□□□□ 0.98
SMPD1P17405 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMPD1P17405 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMPD1P17405 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMPD1P17405 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SMPD1P17405 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMPD1P17405 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMPD1P17405 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMPD1P17405 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMPD1P17405 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms