Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCL4P13236 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCL4P13236 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCL4P13236 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.98■□□□□ 0.47
CCL4P13236 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCL4P13236 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCL4P13236 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCL4P13236 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCL4P13236 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.98■□□□□ 0.47
CCL4P13236 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCL4P13236 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCL4P13236 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCL4P13236 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.97■□□□□ 0.47
CCL4P13236 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.97■□□□□ 0.47
CCL4P13236 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCL4P13236 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCL4P13236 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCL4P13236 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.97■□□□□ 0.47
CCL4P13236 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCL4P13236 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCL4P13236 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.97■□□□□ 0.47
CCL4P13236 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.97■□□□□ 0.47
CCL4P13236 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCL4P13236 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.97■□□□□ 0.47
CCL4P13236 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCL4P13236 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.97■□□□□ 0.47
CCL4P13236 AC092119.3-201ENST00000612618 583 ntBASIC17.97■□□□□ 0.47
CCL4P13236 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.97■□□□□ 0.47
CCL4P13236 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCL4P13236 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCL4P13236 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.97■□□□□ 0.47
CCL4P13236 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCL4P13236 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.96■□□□□ 0.47
CCL4P13236 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCL4P13236 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL4P13236 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL4P13236 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.96■□□□□ 0.47
CCL4P13236 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCL4P13236 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCL4P13236 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL4P13236 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL4P13236 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
CCL4P13236 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL4P13236 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.96■□□□□ 0.47
CCL4P13236 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.96■□□□□ 0.47
CCL4P13236 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.96■□□□□ 0.47
CCL4P13236 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.96■□□□□ 0.47
CCL4P13236 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.96■□□□□ 0.47
CCL4P13236 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.96■□□□□ 0.47
CCL4P13236 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.96■□□□□ 0.47
CCL4P13236 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCL4P13236 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCL4P13236 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL4P13236 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CCL4P13236 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL4P13236 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCL4P13236 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.96■□□□□ 0.47
CCL4P13236 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL4P13236 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.96■□□□□ 0.47
CCL4P13236 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.95■□□□□ 0.46
CCL4P13236 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 MCCD1P1-208ENST00000445732 328 ntBASIC17.95■□□□□ 0.46
CCL4P13236 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.95■□□□□ 0.46
CCL4P13236 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.95■□□□□ 0.46
CCL4P13236 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.95■□□□□ 0.46
CCL4P13236 MIR3180-5-201ENST00000583743 153 ntBASIC17.95■□□□□ 0.46
CCL4P13236 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 NPAP1P7-201ENST00000613027 823 ntBASIC17.95■□□□□ 0.46
CCL4P13236 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.95■□□□□ 0.46
CCL4P13236 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.95■□□□□ 0.46
CCL4P13236 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.95■□□□□ 0.46
CCL4P13236 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCL4P13236 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL4P13236 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.94■□□□□ 0.46
CCL4P13236 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCL4P13236 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CCL4P13236 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CCL4P13236 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.94■□□□□ 0.46
CCL4P13236 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCL4P13236 AC026396.1-201ENST00000419388 421 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms