Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLTAP09496 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.82■□□□□ 0.92
CLTAP09496 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.82■□□□□ 0.92
CLTAP09496 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLTAP09496 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.82■□□□□ 0.92
CLTAP09496 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLTAP09496 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CLTAP09496 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLTAP09496 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTAP09496 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLTAP09496 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTAP09496 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.81■□□□□ 0.92
CLTAP09496 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTAP09496 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLTAP09496 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLTAP09496 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTAP09496 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.81■□□□□ 0.92
CLTAP09496 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.81■□□□□ 0.92
CLTAP09496 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.81■□□□□ 0.92
CLTAP09496 TSPY21P-201ENST00000433481 731 ntBASIC20.81■□□□□ 0.92
CLTAP09496 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.81■□□□□ 0.92
CLTAP09496 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.81■□□□□ 0.92
CLTAP09496 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CLTAP09496 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTAP09496 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLTAP09496 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
CLTAP09496 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTAP09496 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLTAP09496 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTAP09496 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTAP09496 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.8■□□□□ 0.92
CLTAP09496 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTAP09496 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CLTAP09496 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLTAP09496 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLTAP09496 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CLTAP09496 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CLTAP09496 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTAP09496 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLTAP09496 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.8■□□□□ 0.92
CLTAP09496 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.8■□□□□ 0.92
CLTAP09496 AC145285.6-201ENST00000604632 637 ntBASIC20.8■□□□□ 0.92
CLTAP09496 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTAP09496 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CLTAP09496 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLTAP09496 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTAP09496 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLTAP09496 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLTAP09496 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLTAP09496 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.79■□□□□ 0.92
CLTAP09496 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLTAP09496 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLTAP09496 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.79■□□□□ 0.92
CLTAP09496 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
CLTAP09496 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLTAP09496 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.79■□□□□ 0.92
CLTAP09496 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.79■□□□□ 0.92
CLTAP09496 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLTAP09496 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.79■□□□□ 0.92
CLTAP09496 LINC01568-207ENST00000641790 1380 ntBASIC20.79■□□□□ 0.92
CLTAP09496 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLTAP09496 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLTAP09496 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.79■□□□□ 0.92
CLTAP09496 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.79■□□□□ 0.92
CLTAP09496 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLTAP09496 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLTAP09496 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.78■□□□□ 0.92
CLTAP09496 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLTAP09496 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.78■□□□□ 0.92
CLTAP09496 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.78■□□□□ 0.92
CLTAP09496 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.78■□□□□ 0.92
CLTAP09496 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 TSPY14P-201ENST00000303979 915 ntBASIC20.78■□□□□ 0.92
CLTAP09496 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
CLTAP09496 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 TSPY23P-201ENST00000440136 739 ntBASIC20.78■□□□□ 0.92
CLTAP09496 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.78■□□□□ 0.92
CLTAP09496 EGLN1P1-201ENST00000531623 762 ntBASIC20.78■□□□□ 0.92
CLTAP09496 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLTAP09496 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.78■□□□□ 0.92
CLTAP09496 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
CLTAP09496 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CLTAP09496 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CLTAP09496 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CLTAP09496 AC005332.7-201ENST00000614046 2005 ntBASIC20.78■□□□□ 0.92
CLTAP09496 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.78■□□□□ 0.92
CLTAP09496 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLTAP09496 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms