Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHGBP05060 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.9■■□□□ 1.26
CHGBP05060 AC007663.1-201ENST00000438948 1240 ntBASIC22.9■■□□□ 1.26
CHGBP05060 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.9■■□□□ 1.26
CHGBP05060 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.9■■□□□ 1.26
CHGBP05060 LINC01023-201ENST00000606054 436 ntBASIC22.9■■□□□ 1.26
CHGBP05060 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.9■■□□□ 1.26
CHGBP05060 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHGBP05060 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHGBP05060 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHGBP05060 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHGBP05060 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHGBP05060 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CHGBP05060 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.9■■□□□ 1.26
CHGBP05060 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHGBP05060 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.9■■□□□ 1.26
CHGBP05060 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHGBP05060 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.9■■□□□ 1.26
CHGBP05060 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CHGBP05060 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
CHGBP05060 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.89■■□□□ 1.26
CHGBP05060 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CHGBP05060 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.89■■□□□ 1.25
CHGBP05060 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHGBP05060 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
CHGBP05060 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.89■■□□□ 1.25
CHGBP05060 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHGBP05060 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHGBP05060 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.25
CHGBP05060 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.89■■□□□ 1.25
CHGBP05060 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
CHGBP05060 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
CHGBP05060 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHGBP05060 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHGBP05060 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
CHGBP05060 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.88■■□□□ 1.25
CHGBP05060 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHGBP05060 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHGBP05060 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHGBP05060 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.88■■□□□ 1.25
CHGBP05060 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHGBP05060 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHGBP05060 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC22.88■■□□□ 1.25
CHGBP05060 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.88■■□□□ 1.25
CHGBP05060 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.88■■□□□ 1.25
CHGBP05060 EGLN1P1-201ENST00000531623 762 ntBASIC22.88■■□□□ 1.25
CHGBP05060 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.88■■□□□ 1.25
CHGBP05060 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHGBP05060 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHGBP05060 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.88■■□□□ 1.25
CHGBP05060 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.87■■□□□ 1.25
CHGBP05060 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.87■■□□□ 1.25
CHGBP05060 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.87■■□□□ 1.25
CHGBP05060 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CHGBP05060 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 AP003041.3-201ENST00000527151 707 ntBASIC22.87■■□□□ 1.25
CHGBP05060 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.87■■□□□ 1.25
CHGBP05060 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.87■■□□□ 1.25
CHGBP05060 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
CHGBP05060 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHGBP05060 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHGBP05060 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHGBP05060 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.86■■□□□ 1.25
CHGBP05060 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CHGBP05060 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHGBP05060 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHGBP05060 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHGBP05060 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHGBP05060 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHGBP05060 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHGBP05060 AC005521.1-201ENST00000393351 872 ntBASIC22.86■■□□□ 1.25
CHGBP05060 KRT18P57-201ENST00000443599 1254 ntBASIC22.86■■□□□ 1.25
CHGBP05060 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22.86■■□□□ 1.25
CHGBP05060 C2orf69P3-201ENST00000565542 1120 ntBASIC22.86■■□□□ 1.25
CHGBP05060 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.86■■□□□ 1.25
CHGBP05060 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHGBP05060 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.86■■□□□ 1.25
CHGBP05060 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHGBP05060 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHGBP05060 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
CHGBP05060 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHGBP05060 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHGBP05060 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.85■■□□□ 1.25
CHGBP05060 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHGBP05060 AC098818.2-201ENST00000564925 2320 ntBASIC22.85■■□□□ 1.25
CHGBP05060 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHGBP05060 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms