Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRAP01903 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRAP01903 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRAP01903 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRAP01903 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRAP01903 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRAP01903 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRAP01903 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DRAP01903 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
HLA-DRAP01903 AC079598.2-202ENST00000546624 1451 ntBASIC20.5■□□□□ 0.87
HLA-DRAP01903 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DRAP01903 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DRAP01903 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DRAP01903 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DRAP01903 AIRN-201ENST00000601203 4374 ntBASIC20.49■□□□□ 0.87
HLA-DRAP01903 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.49■□□□□ 0.87
HLA-DRAP01903 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.49■□□□□ 0.87
HLA-DRAP01903 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.49■□□□□ 0.87
HLA-DRAP01903 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DRAP01903 MFAP1P1-201ENST00000442257 1255 ntBASIC20.49■□□□□ 0.87
HLA-DRAP01903 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DRAP01903 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.49■□□□□ 0.87
HLA-DRAP01903 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.49■□□□□ 0.87
HLA-DRAP01903 AP000525.1-201ENST00000608286 694 ntBASIC20.49■□□□□ 0.87
HLA-DRAP01903 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DRAP01903 AC087289.5-201ENST00000586076 3175 ntBASIC20.49■□□□□ 0.87
HLA-DRAP01903 AC098818.2-201ENST00000564925 2320 ntBASIC20.49■□□□□ 0.87
HLA-DRAP01903 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DRAP01903 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DRAP01903 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DRAP01903 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HLA-DRAP01903 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.48■□□□□ 0.87
HLA-DRAP01903 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.48■□□□□ 0.87
HLA-DRAP01903 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DRAP01903 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DRAP01903 UNC93B2-201ENST00000285383 730 ntBASIC20.48■□□□□ 0.87
HLA-DRAP01903 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DRAP01903 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DRAP01903 CRYGFP-201ENST00000418459 633 ntBASIC20.48■□□□□ 0.87
HLA-DRAP01903 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DRAP01903 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.48■□□□□ 0.87
HLA-DRAP01903 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HLA-DRAP01903 BX323043.1-201ENST00000641006 1765 ntBASIC20.48■□□□□ 0.87
HLA-DRAP01903 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DRAP01903 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
HLA-DRAP01903 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DRAP01903 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HLA-DRAP01903 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DRAP01903 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HLA-DRAP01903 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HLA-DRAP01903 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DRAP01903 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
HLA-DRAP01903 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DRAP01903 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
HLA-DRAP01903 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DRAP01903 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DRAP01903 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DRAP01903 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
HLA-DRAP01903 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DRAP01903 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DRAP01903 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DRAP01903 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DRAP01903 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DRAP01903 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DRAP01903 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DRAP01903 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DRAP01903 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HLA-DRAP01903 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.46■□□□□ 0.87
HLA-DRAP01903 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DRAP01903 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.46■□□□□ 0.87
HLA-DRAP01903 AL390955.1-201ENST00000428694 934 ntBASIC20.46■□□□□ 0.87
HLA-DRAP01903 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.46■□□□□ 0.87
HLA-DRAP01903 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DRAP01903 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DRAP01903 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DRAP01903 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.45■□□□□ 0.86
HLA-DRAP01903 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.45■□□□□ 0.86
HLA-DRAP01903 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DRAP01903 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.45■□□□□ 0.86
HLA-DRAP01903 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms