Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD4P01730 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD4P01730 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.03■□□□□ 0.96
CD4P01730 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD4P01730 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.03■□□□□ 0.96
CD4P01730 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.03■□□□□ 0.96
CD4P01730 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD4P01730 AC011498.5-201ENST00000592027 486 ntBASIC21.03■□□□□ 0.96
CD4P01730 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.03■□□□□ 0.96
CD4P01730 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CD4P01730 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.03■□□□□ 0.96
CD4P01730 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD4P01730 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.03■□□□□ 0.96
CD4P01730 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.03■□□□□ 0.96
CD4P01730 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CD4P01730 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
CD4P01730 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CD4P01730 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CD4P01730 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CD4P01730 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.03■□□□□ 0.96
CD4P01730 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CD4P01730 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD4P01730 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.03■□□□□ 0.96
CD4P01730 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.02■□□□□ 0.96
CD4P01730 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.02■□□□□ 0.96
CD4P01730 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
CD4P01730 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CD4P01730 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.02■□□□□ 0.96
CD4P01730 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 AP002383.4-201ENST00000442518 975 ntBASIC21.02■□□□□ 0.96
CD4P01730 AC034232.1-201ENST00000506026 1064 ntBASIC21.02■□□□□ 0.96
CD4P01730 UNC93B7-201ENST00000509439 705 ntBASIC21.02■□□□□ 0.96
CD4P01730 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.02■□□□□ 0.96
CD4P01730 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.02■□□□□ 0.96
CD4P01730 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.02■□□□□ 0.96
CD4P01730 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.02■□□□□ 0.96
CD4P01730 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.02■□□□□ 0.96
CD4P01730 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.02■□□□□ 0.96
CD4P01730 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CD4P01730 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.02■□□□□ 0.96
CD4P01730 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD4P01730 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CD4P01730 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.02■□□□□ 0.95
CD4P01730 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD4P01730 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.01■□□□□ 0.95
CD4P01730 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD4P01730 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CD4P01730 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD4P01730 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD4P01730 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD4P01730 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.01■□□□□ 0.95
CD4P01730 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.01■□□□□ 0.95
CD4P01730 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.01■□□□□ 0.95
CD4P01730 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD4P01730 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
CD4P01730 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD4P01730 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD4P01730 AL845331.1-201ENST00000424978 1190 ntBASIC21.01■□□□□ 0.95
CD4P01730 PVRIG2P-201ENST00000435460 978 ntBASIC21.01■□□□□ 0.95
CD4P01730 KRT17P6-201ENST00000453795 1220 ntBASIC21.01■□□□□ 0.95
CD4P01730 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CD4P01730 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.01■□□□□ 0.95
CD4P01730 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.01■□□□□ 0.95
CD4P01730 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.01■□□□□ 0.95
CD4P01730 AL121672.3-201ENST00000608644 468 ntBASIC21.01■□□□□ 0.95
CD4P01730 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.01■□□□□ 0.95
CD4P01730 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD4P01730 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD4P01730 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD4P01730 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD4P01730 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD4P01730 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21■□□□□ 0.95
CD4P01730 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21■□□□□ 0.95
CD4P01730 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21■□□□□ 0.95
CD4P01730 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CD4P01730 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CD4P01730 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD4P01730 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms