Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.15■□□□□ 0.66
PDGFBP01127 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.15■□□□□ 0.66
PDGFBP01127 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.15■□□□□ 0.66
PDGFBP01127 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.15■□□□□ 0.66
PDGFBP01127 AC055717.3-201ENST00000622967 595 ntBASIC19.15■□□□□ 0.66
PDGFBP01127 AC112497.1-201ENST00000624824 639 ntBASIC19.15■□□□□ 0.66
PDGFBP01127 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PDGFBP01127 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PDGFBP01127 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.15■□□□□ 0.66
PDGFBP01127 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.14■□□□□ 0.66
PDGFBP01127 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PDGFBP01127 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFBP01127 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFBP01127 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
PDGFBP01127 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFBP01127 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFBP01127 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.14■□□□□ 0.65
PDGFBP01127 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.14■□□□□ 0.65
PDGFBP01127 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.14■□□□□ 0.65
PDGFBP01127 RNPS1P1-201ENST00000507437 918 ntBASIC19.14■□□□□ 0.65
PDGFBP01127 MIR3180-5-201ENST00000583743 153 ntBASIC19.14■□□□□ 0.65
PDGFBP01127 AL390719.2-201ENST00000606993 987 ntBASIC19.14■□□□□ 0.65
PDGFBP01127 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFBP01127 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFBP01127 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFBP01127 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFBP01127 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFBP01127 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.14■□□□□ 0.65
PDGFBP01127 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFBP01127 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFBP01127 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFBP01127 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFBP01127 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFBP01127 MIR564-202ENST00000385049 94 ntBASIC19.13■□□□□ 0.65
PDGFBP01127 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.13■□□□□ 0.65
PDGFBP01127 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.13■□□□□ 0.65
PDGFBP01127 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.13■□□□□ 0.65
PDGFBP01127 AC009065.1-201ENST00000564055 1225 ntBASIC19.13■□□□□ 0.65
PDGFBP01127 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFBP01127 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.13■□□□□ 0.65
PDGFBP01127 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PDGFBP01127 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PDGFBP01127 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.13■□□□□ 0.65
PDGFBP01127 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFBP01127 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFBP01127 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFBP01127 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PDGFBP01127 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFBP01127 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFBP01127 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFBP01127 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFBP01127 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.12■□□□□ 0.65
PDGFBP01127 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PDGFBP01127 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFBP01127 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.12■□□□□ 0.65
PDGFBP01127 NSUN5P1-202ENST00000421140 1535 ntBASIC19.12■□□□□ 0.65
PDGFBP01127 NSUN5P2-203ENST00000457352 1529 ntBASIC19.12■□□□□ 0.65
PDGFBP01127 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFBP01127 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.12■□□□□ 0.65
PDGFBP01127 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFBP01127 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFBP01127 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFBP01127 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.12■□□□□ 0.65
PDGFBP01127 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.12■□□□□ 0.65
PDGFBP01127 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PDGFBP01127 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFBP01127 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.12■□□□□ 0.65
PDGFBP01127 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.12■□□□□ 0.65
PDGFBP01127 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.12■□□□□ 0.65
PDGFBP01127 AP005901.3-202ENST00000581653 237 ntBASIC19.12■□□□□ 0.65
PDGFBP01127 AL049840.3-201ENST00000602669 611 ntBASIC19.12■□□□□ 0.65
PDGFBP01127 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.12■□□□□ 0.65
PDGFBP01127 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PDGFBP01127 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.12■□□□□ 0.65
PDGFBP01127 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFBP01127 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PDGFBP01127 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFBP01127 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDGFBP01127 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.11■□□□□ 0.65
PDGFBP01127 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFBP01127 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.11■□□□□ 0.65
PDGFBP01127 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFBP01127 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.11■□□□□ 0.65
PDGFBP01127 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFBP01127 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.11■□□□□ 0.65
PDGFBP01127 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFBP01127 KRT18P67-201ENST00000432816 1264 ntBASIC19.11■□□□□ 0.65
PDGFBP01127 MCCD1P1-208ENST00000445732 328 ntBASIC19.11■□□□□ 0.65
PDGFBP01127 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.11■□□□□ 0.65
PDGFBP01127 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFBP01127 AC091607.1-201ENST00000490318 1060 ntBASIC19.11■□□□□ 0.65
PDGFBP01127 AP003733.1-201ENST00000491725 852 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms