Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.11■□□□□ 0.81
ZBED1O96006 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZBED1O96006 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZBED1O96006 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZBED1O96006 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.11■□□□□ 0.81
ZBED1O96006 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.11■□□□□ 0.81
ZBED1O96006 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.11■□□□□ 0.81
ZBED1O96006 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.11■□□□□ 0.81
ZBED1O96006 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.11■□□□□ 0.81
ZBED1O96006 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZBED1O96006 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.11■□□□□ 0.81
ZBED1O96006 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.11■□□□□ 0.81
ZBED1O96006 AC018445.3-201ENST00000624177 1945 ntBASIC20.11■□□□□ 0.81
ZBED1O96006 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
ZBED1O96006 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZBED1O96006 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ZBED1O96006 KRT8P11-201ENST00000409686 1436 ntBASIC20.1■□□□□ 0.81
ZBED1O96006 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.1■□□□□ 0.81
ZBED1O96006 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.1■□□□□ 0.81
ZBED1O96006 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZBED1O96006 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.1■□□□□ 0.81
ZBED1O96006 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
ZBED1O96006 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZBED1O96006 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.1■□□□□ 0.81
ZBED1O96006 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.1■□□□□ 0.81
ZBED1O96006 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZBED1O96006 TSPY21P-201ENST00000433481 731 ntBASIC20.1■□□□□ 0.81
ZBED1O96006 MFAP1P1-201ENST00000442257 1255 ntBASIC20.1■□□□□ 0.81
ZBED1O96006 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.1■□□□□ 0.81
ZBED1O96006 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.1■□□□□ 0.81
ZBED1O96006 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZBED1O96006 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ZBED1O96006 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZBED1O96006 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZBED1O96006 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZBED1O96006 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.1■□□□□ 0.81
ZBED1O96006 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZBED1O96006 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.1■□□□□ 0.81
ZBED1O96006 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZBED1O96006 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZBED1O96006 AL032819.2-201ENST00000624543 2162 ntBASIC20.1■□□□□ 0.81
ZBED1O96006 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZBED1O96006 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
ZBED1O96006 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZBED1O96006 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ZBED1O96006 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZBED1O96006 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZBED1O96006 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZBED1O96006 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
ZBED1O96006 AC087499.1-201ENST00000418141 1075 ntBASIC20.09■□□□□ 0.81
ZBED1O96006 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
ZBED1O96006 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.09■□□□□ 0.81
ZBED1O96006 PRSS44-201ENST00000515154 1146 ntBASIC20.09■□□□□ 0.81
ZBED1O96006 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.09■□□□□ 0.81
ZBED1O96006 CKBP1-201ENST00000565489 1086 ntBASIC20.09■□□□□ 0.81
ZBED1O96006 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.09■□□□□ 0.81
ZBED1O96006 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.09■□□□□ 0.81
ZBED1O96006 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZBED1O96006 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZBED1O96006 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.09■□□□□ 0.81
ZBED1O96006 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ZBED1O96006 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZBED1O96006 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZBED1O96006 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ZBED1O96006 KRT8P9-201ENST00000558927 1449 ntBASIC20.09■□□□□ 0.81
ZBED1O96006 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZBED1O96006 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZBED1O96006 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZBED1O96006 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZBED1O96006 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
ZBED1O96006 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZBED1O96006 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZBED1O96006 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ZBED1O96006 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZBED1O96006 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZBED1O96006 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
ZBED1O96006 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.08■□□□□ 0.81
ZBED1O96006 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.08■□□□□ 0.81
ZBED1O96006 TSPY23P-201ENST00000440136 739 ntBASIC20.08■□□□□ 0.81
ZBED1O96006 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.08■□□□□ 0.81
ZBED1O96006 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ZBED1O96006 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZBED1O96006 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ZBED1O96006 BX323043.1-201ENST00000641006 1765 ntBASIC20.08■□□□□ 0.8
ZBED1O96006 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ZBED1O96006 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
ZBED1O96006 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZBED1O96006 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ZBED1O96006 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.07■□□□□ 0.8
ZBED1O96006 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZBED1O96006 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.07■□□□□ 0.8
ZBED1O96006 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
ZBED1O96006 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZBED1O96006 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.07■□□□□ 0.8
ZBED1O96006 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZBED1O96006 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.07■□□□□ 0.8
ZBED1O96006 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZBED1O96006 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZBED1O96006 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.07■□□□□ 0.8
ZBED1O96006 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms