Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.27■□□□□ 0.68
USP1O94782 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.27■□□□□ 0.68
USP1O94782 MTDHP1-201ENST00000605323 784 ntBASIC19.27■□□□□ 0.68
USP1O94782 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 AC004264.1-201ENST00000608354 794 ntBASIC19.27■□□□□ 0.68
USP1O94782 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
USP1O94782 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.27■□□□□ 0.68
USP1O94782 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP1O94782 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
USP1O94782 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP1O94782 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP1O94782 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
USP1O94782 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.67
USP1O94782 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP1O94782 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP1O94782 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
USP1O94782 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.26■□□□□ 0.67
USP1O94782 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.26■□□□□ 0.67
USP1O94782 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP1O94782 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP1O94782 AC026366.1-201ENST00000488803 879 ntBASIC19.26■□□□□ 0.67
USP1O94782 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
USP1O94782 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.26■□□□□ 0.67
USP1O94782 AC069544.1-201ENST00000609399 999 ntBASIC19.26■□□□□ 0.67
USP1O94782 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.26■□□□□ 0.67
USP1O94782 HLA-A-209ENST00000638375 975 ntBASIC19.26■□□□□ 0.67
USP1O94782 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP1O94782 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP1O94782 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP1O94782 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP1O94782 AC093525.10-201ENST00000625130 1569 ntBASIC19.26■□□□□ 0.67
USP1O94782 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP1O94782 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP1O94782 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP1O94782 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP1O94782 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.26■□□□□ 0.67
USP1O94782 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP1O94782 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP1O94782 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
USP1O94782 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP1O94782 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.25■□□□□ 0.67
USP1O94782 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP1O94782 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP1O94782 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP1O94782 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP1O94782 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP1O94782 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP1O94782 AL160286.2-201ENST00000567150 934 ntBASIC19.25■□□□□ 0.67
USP1O94782 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.25■□□□□ 0.67
USP1O94782 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
USP1O94782 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.25■□□□□ 0.67
USP1O94782 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
USP1O94782 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
USP1O94782 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.25■□□□□ 0.67
USP1O94782 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP1O94782 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP1O94782 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP1O94782 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
USP1O94782 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
USP1O94782 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
USP1O94782 AL031598.1-201ENST00000561511 1773 ntBASIC19.24■□□□□ 0.67
USP1O94782 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP1O94782 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP1O94782 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP1O94782 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.24■□□□□ 0.67
USP1O94782 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USP1O94782 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP1O94782 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP1O94782 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP1O94782 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.24■□□□□ 0.67
USP1O94782 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.24■□□□□ 0.67
USP1O94782 TSPY21P-201ENST00000433481 731 ntBASIC19.24■□□□□ 0.67
USP1O94782 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.24■□□□□ 0.67
USP1O94782 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP1O94782 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.24■□□□□ 0.67
USP1O94782 MIR4651-201ENST00000582622 73 ntBASIC19.24■□□□□ 0.67
USP1O94782 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.24■□□□□ 0.67
USP1O94782 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
USP1O94782 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP1O94782 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.24■□□□□ 0.67
USP1O94782 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
USP1O94782 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP1O94782 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
USP1O94782 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
USP1O94782 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.23■□□□□ 0.67
USP1O94782 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP1O94782 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
USP1O94782 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms