Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT3O75175 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT3O75175 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT3O75175 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.45■□□□□ 0.54
CNOT3O75175 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.45■□□□□ 0.54
CNOT3O75175 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT3O75175 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT3O75175 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT3O75175 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.45■□□□□ 0.54
CNOT3O75175 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT3O75175 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.45■□□□□ 0.54
CNOT3O75175 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT3O75175 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT3O75175 KRT16P1-201ENST00000399124 1418 ntBASIC18.45■□□□□ 0.54
CNOT3O75175 KRT8P9-201ENST00000558927 1449 ntBASIC18.45■□□□□ 0.54
CNOT3O75175 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.45■□□□□ 0.54
CNOT3O75175 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT3O75175 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT3O75175 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT3O75175 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.44■□□□□ 0.54
CNOT3O75175 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT3O75175 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
CNOT3O75175 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.44■□□□□ 0.54
CNOT3O75175 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT3O75175 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.44■□□□□ 0.54
CNOT3O75175 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT3O75175 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT3O75175 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT3O75175 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.44■□□□□ 0.54
CNOT3O75175 AC116562.2-201ENST00000507042 360 ntBASIC18.44■□□□□ 0.54
CNOT3O75175 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.44■□□□□ 0.54
CNOT3O75175 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.44■□□□□ 0.54
CNOT3O75175 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.44■□□□□ 0.54
CNOT3O75175 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.44■□□□□ 0.54
CNOT3O75175 AP000525.1-201ENST00000608286 694 ntBASIC18.44■□□□□ 0.54
CNOT3O75175 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.44■□□□□ 0.54
CNOT3O75175 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT3O75175 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT3O75175 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT3O75175 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
CNOT3O75175 AC020763.4-201ENST00000623414 4170 ntBASIC18.44■□□□□ 0.54
CNOT3O75175 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT3O75175 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.44■□□□□ 0.54
CNOT3O75175 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
CNOT3O75175 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.43■□□□□ 0.54
CNOT3O75175 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT3O75175 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT3O75175 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.43■□□□□ 0.54
CNOT3O75175 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.43■□□□□ 0.54
CNOT3O75175 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT3O75175 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CNOT3O75175 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT3O75175 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.43■□□□□ 0.54
CNOT3O75175 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT3O75175 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.43■□□□□ 0.54
CNOT3O75175 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.43■□□□□ 0.54
CNOT3O75175 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.43■□□□□ 0.54
CNOT3O75175 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.43■□□□□ 0.54
CNOT3O75175 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.43■□□□□ 0.54
CNOT3O75175 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CNOT3O75175 AC097493.4-201ENST00000641197 219 ntBASIC18.43■□□□□ 0.54
CNOT3O75175 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT3O75175 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CNOT3O75175 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNOT3O75175 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CNOT3O75175 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.43■□□□□ 0.54
CNOT3O75175 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CNOT3O75175 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.42■□□□□ 0.54
CNOT3O75175 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.42■□□□□ 0.54
CNOT3O75175 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CNOT3O75175 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.42■□□□□ 0.54
CNOT3O75175 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.42■□□□□ 0.54
CNOT3O75175 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 MESTP1-201ENST00000404287 994 ntBASIC18.42■□□□□ 0.54
CNOT3O75175 TUBB8P6-201ENST00000436895 1288 ntBASIC18.42■□□□□ 0.54
CNOT3O75175 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.42■□□□□ 0.54
CNOT3O75175 AL445675.2-201ENST00000620291 557 ntBASIC18.42■□□□□ 0.54
CNOT3O75175 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.42■□□□□ 0.54
CNOT3O75175 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.42■□□□□ 0.54
CNOT3O75175 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CNOT3O75175 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.42■□□□□ 0.54
CNOT3O75175 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNOT3O75175 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNOT3O75175 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms