Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA12O60330 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCDHGA12O60330 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
PCDHGA12O60330 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA12O60330 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA12O60330 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 AL441883.1-201ENST00000566170 1045 ntBASIC18.87■□□□□ 0.61
PCDHGA12O60330 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCDHGA12O60330 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PCDHGA12O60330 AP001271.2-201ENST00000624018 1556 ntBASIC18.87■□□□□ 0.61
PCDHGA12O60330 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDHGA12O60330 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA12O60330 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA12O60330 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA12O60330 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA12O60330 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA12O60330 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA12O60330 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA12O60330 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA12O60330 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA12O60330 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 PRSS44-201ENST00000515154 1146 ntBASIC18.86■□□□□ 0.61
PCDHGA12O60330 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA12O60330 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 AL023973.1-201ENST00000624619 620 ntBASIC18.86■□□□□ 0.61
PCDHGA12O60330 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA12O60330 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA12O60330 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGA12O60330 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA12O60330 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA12O60330 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA12O60330 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGA12O60330 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA12O60330 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGA12O60330 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA12O60330 AP000523.1-201ENST00000398242 1049 ntBASIC18.85■□□□□ 0.61
PCDHGA12O60330 AL359075.1-203ENST00000462729 1002 ntBASIC18.85■□□□□ 0.61
PCDHGA12O60330 AP003041.3-201ENST00000527151 707 ntBASIC18.85■□□□□ 0.61
PCDHGA12O60330 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGA12O60330 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGA12O60330 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PCDHGA12O60330 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA12O60330 AC116407.4-201ENST00000623319 1061 ntBASIC18.85■□□□□ 0.61
PCDHGA12O60330 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA12O60330 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA12O60330 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA12O60330 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA12O60330 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA12O60330 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA12O60330 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA12O60330 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA12O60330 BX119927.1-201ENST00000636596 1552 ntBASIC18.85■□□□□ 0.61
PCDHGA12O60330 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA12O60330 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA12O60330 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
PCDHGA12O60330 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGA12O60330 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA12O60330 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA12O60330 AC005332.1-201ENST00000577698 1310 ntBASIC18.84■□□□□ 0.61
PCDHGA12O60330 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCDHGA12O60330 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGA12O60330 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA12O60330 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA12O60330 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
PCDHGA12O60330 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA12O60330 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA12O60330 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGA12O60330 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA12O60330 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA12O60330 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA12O60330 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA12O60330 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGA12O60330 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA12O60330 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA12O60330 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms