Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKNO60260 CKBP1-201ENST00000565489 1086 ntBASIC17.73■□□□□ 0.43
PRKNO60260 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKNO60260 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.73■□□□□ 0.43
PRKNO60260 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.73■□□□□ 0.43
PRKNO60260 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.73■□□□□ 0.43
PRKNO60260 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKNO60260 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKNO60260 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
PRKNO60260 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKNO60260 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKNO60260 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRKNO60260 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRKNO60260 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKNO60260 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.73■□□□□ 0.43
PRKNO60260 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKNO60260 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRKNO60260 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKNO60260 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKNO60260 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
PRKNO60260 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKNO60260 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKNO60260 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKNO60260 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.72■□□□□ 0.43
PRKNO60260 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRKNO60260 LINC01568-207ENST00000641790 1380 ntBASIC17.72■□□□□ 0.43
PRKNO60260 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKNO60260 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
PRKNO60260 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.72■□□□□ 0.43
PRKNO60260 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKNO60260 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.72■□□□□ 0.43
PRKNO60260 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.72■□□□□ 0.43
PRKNO60260 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PRKNO60260 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.72■□□□□ 0.43
PRKNO60260 AC145285.6-201ENST00000604632 637 ntBASIC17.72■□□□□ 0.43
PRKNO60260 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRKNO60260 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PRKNO60260 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PRKNO60260 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.72■□□□□ 0.43
PRKNO60260 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRKNO60260 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKNO60260 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRKNO60260 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.71■□□□□ 0.43
PRKNO60260 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.71■□□□□ 0.43
PRKNO60260 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKNO60260 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKNO60260 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKNO60260 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PRKNO60260 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.71■□□□□ 0.43
PRKNO60260 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.71■□□□□ 0.43
PRKNO60260 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.71■□□□□ 0.43
PRKNO60260 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.71■□□□□ 0.43
PRKNO60260 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.71■□□□□ 0.43
PRKNO60260 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PRKNO60260 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKNO60260 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKNO60260 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PRKNO60260 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKNO60260 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKNO60260 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.71■□□□□ 0.43
PRKNO60260 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKNO60260 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.71■□□□□ 0.43
PRKNO60260 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.71■□□□□ 0.43
PRKNO60260 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PRKNO60260 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PRKNO60260 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKNO60260 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKNO60260 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
PRKNO60260 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.7■□□□□ 0.42
PRKNO60260 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.7■□□□□ 0.42
PRKNO60260 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.7■□□□□ 0.42
PRKNO60260 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKNO60260 AC087289.5-201ENST00000586076 3175 ntBASIC17.7■□□□□ 0.42
PRKNO60260 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKNO60260 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.7■□□□□ 0.42
PRKNO60260 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKNO60260 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PRKNO60260 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.7■□□□□ 0.42
PRKNO60260 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKNO60260 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
PRKNO60260 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.7■□□□□ 0.42
PRKNO60260 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.7■□□□□ 0.42
PRKNO60260 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.7■□□□□ 0.42
PRKNO60260 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.7■□□□□ 0.42
PRKNO60260 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.7■□□□□ 0.42
PRKNO60260 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.7■□□□□ 0.42
PRKNO60260 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.7■□□□□ 0.42
PRKNO60260 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKNO60260 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKNO60260 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKNO60260 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.69■□□□□ 0.42
PRKNO60260 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKNO60260 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKNO60260 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.69■□□□□ 0.42
PRKNO60260 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKNO60260 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKNO60260 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKNO60260 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKNO60260 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKNO60260 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms