Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE3O43900 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE3O43900 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE3O43900 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.29■□□□□ 0.52
PRICKLE3O43900 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE3O43900 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE3O43900 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 AL353719.1-201ENST00000566847 864 ntBASIC18.29■□□□□ 0.52
PRICKLE3O43900 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 AC133561.5-201ENST00000635547 218 ntBASIC18.29■□□□□ 0.52
PRICKLE3O43900 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE3O43900 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE3O43900 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE3O43900 KRT8P3-201ENST00000519669 1449 ntBASIC18.29■□□□□ 0.52
PRICKLE3O43900 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PRICKLE3O43900 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE3O43900 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE3O43900 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE3O43900 AL161938.1-201ENST00000569833 2180 ntBASIC18.28■□□□□ 0.52
PRICKLE3O43900 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PRICKLE3O43900 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE3O43900 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.28■□□□□ 0.52
PRICKLE3O43900 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.28■□□□□ 0.52
PRICKLE3O43900 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE3O43900 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE3O43900 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE3O43900 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.28■□□□□ 0.52
PRICKLE3O43900 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.28■□□□□ 0.52
PRICKLE3O43900 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PRICKLE3O43900 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.28■□□□□ 0.52
PRICKLE3O43900 AC010331.1-201ENST00000611423 582 ntBASIC18.28■□□□□ 0.52
PRICKLE3O43900 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE3O43900 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE3O43900 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE3O43900 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE3O43900 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.28■□□□□ 0.52
PRICKLE3O43900 LINC01568-207ENST00000641790 1380 ntBASIC18.28■□□□□ 0.52
PRICKLE3O43900 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE3O43900 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE3O43900 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE3O43900 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE3O43900 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE3O43900 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.27■□□□□ 0.52
PRICKLE3O43900 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE3O43900 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PRICKLE3O43900 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.27■□□□□ 0.52
PRICKLE3O43900 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.27■□□□□ 0.52
PRICKLE3O43900 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE3O43900 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE3O43900 AC007663.1-201ENST00000438948 1240 ntBASIC18.27■□□□□ 0.52
PRICKLE3O43900 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.27■□□□□ 0.52
PRICKLE3O43900 AC008622.2-201ENST00000617006 1229 ntBASIC18.27■□□□□ 0.52
PRICKLE3O43900 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE3O43900 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE3O43900 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE3O43900 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PRICKLE3O43900 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.27■□□□□ 0.51
PRICKLE3O43900 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PRICKLE3O43900 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PRICKLE3O43900 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.27■□□□□ 0.51
PRICKLE3O43900 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PRICKLE3O43900 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PRICKLE3O43900 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRICKLE3O43900 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.26■□□□□ 0.51
PRICKLE3O43900 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.26■□□□□ 0.51
PRICKLE3O43900 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.26■□□□□ 0.51
PRICKLE3O43900 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
PRICKLE3O43900 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.26■□□□□ 0.51
PRICKLE3O43900 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.26■□□□□ 0.51
PRICKLE3O43900 TSPY17P-201ENST00000450329 467 ntBASIC18.26■□□□□ 0.51
PRICKLE3O43900 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.26■□□□□ 0.51
PRICKLE3O43900 AC116562.4-202ENST00000641738 218 ntBASIC18.26■□□□□ 0.51
PRICKLE3O43900 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
PRICKLE3O43900 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE3O43900 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms