Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.78■□□□□ 0.76
MSI1O43347 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.78■□□□□ 0.76
MSI1O43347 AL023803.3-201ENST00000615559 522 ntBASIC19.78■□□□□ 0.76
MSI1O43347 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MSI1O43347 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MSI1O43347 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
MSI1O43347 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.78■□□□□ 0.76
MSI1O43347 IRX1P1-201ENST00000438849 1838 ntBASIC19.78■□□□□ 0.76
MSI1O43347 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.78■□□□□ 0.76
MSI1O43347 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MSI1O43347 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MSI1O43347 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.78■□□□□ 0.76
MSI1O43347 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
MSI1O43347 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.77■□□□□ 0.76
MSI1O43347 AC092338.2-201ENST00000568827 1415 ntBASIC19.77■□□□□ 0.76
MSI1O43347 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MSI1O43347 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.77■□□□□ 0.76
MSI1O43347 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
MSI1O43347 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.77■□□□□ 0.76
MSI1O43347 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
MSI1O43347 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
MSI1O43347 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MSI1O43347 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.77■□□□□ 0.76
MSI1O43347 AC007663.1-201ENST00000438948 1240 ntBASIC19.77■□□□□ 0.76
MSI1O43347 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.77■□□□□ 0.76
MSI1O43347 SLC25A3P1-201ENST00000443844 931 ntBASIC19.77■□□□□ 0.76
MSI1O43347 CCR12P-201ENST00000446203 998 ntBASIC19.77■□□□□ 0.76
MSI1O43347 KRT18P21-201ENST00000515767 1272 ntBASIC19.77■□□□□ 0.76
MSI1O43347 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
MSI1O43347 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.77■□□□□ 0.76
MSI1O43347 AC116562.4-202ENST00000641738 218 ntBASIC19.77■□□□□ 0.76
MSI1O43347 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MSI1O43347 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MSI1O43347 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.77■□□□□ 0.76
MSI1O43347 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.77■□□□□ 0.75
MSI1O43347 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
MSI1O43347 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MSI1O43347 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MSI1O43347 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.76■□□□□ 0.75
MSI1O43347 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.76■□□□□ 0.75
MSI1O43347 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MSI1O43347 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.76■□□□□ 0.75
MSI1O43347 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MSI1O43347 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MSI1O43347 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MSI1O43347 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
MSI1O43347 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.76■□□□□ 0.75
MSI1O43347 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MSI1O43347 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MSI1O43347 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.76■□□□□ 0.75
MSI1O43347 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MSI1O43347 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
MSI1O43347 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MSI1O43347 RCN1P1-201ENST00000400413 996 ntBASIC19.76■□□□□ 0.75
MSI1O43347 AC005363.2-201ENST00000618631 242 ntBASIC19.76■□□□□ 0.75
MSI1O43347 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.76■□□□□ 0.75
MSI1O43347 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MSI1O43347 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.76■□□□□ 0.75
MSI1O43347 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MSI1O43347 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.76■□□□□ 0.75
MSI1O43347 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MSI1O43347 AIRN-201ENST00000601203 4374 ntBASIC19.76■□□□□ 0.75
MSI1O43347 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MSI1O43347 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
MSI1O43347 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MSI1O43347 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.75■□□□□ 0.75
MSI1O43347 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MSI1O43347 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.75■□□□□ 0.75
MSI1O43347 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.75■□□□□ 0.75
MSI1O43347 CA15P1-201ENST00000481698 905 ntBASIC19.75■□□□□ 0.75
MSI1O43347 AC128688.1-201ENST00000487626 519 ntBASIC19.75■□□□□ 0.75
MSI1O43347 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.75■□□□□ 0.75
MSI1O43347 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
MSI1O43347 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
MSI1O43347 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.75■□□□□ 0.75
MSI1O43347 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MSI1O43347 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.75■□□□□ 0.75
MSI1O43347 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MSI1O43347 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MSI1O43347 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.75■□□□□ 0.75
MSI1O43347 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MSI1O43347 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
MSI1O43347 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MSI1O43347 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MSI1O43347 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.74■□□□□ 0.75
MSI1O43347 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MSI1O43347 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.74■□□□□ 0.75
MSI1O43347 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.74■□□□□ 0.75
MSI1O43347 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MSI1O43347 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.74■□□□□ 0.75
MSI1O43347 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.74■□□□□ 0.75
MSI1O43347 AC005521.1-201ENST00000393351 872 ntBASIC19.74■□□□□ 0.75
MSI1O43347 AC113347.1-201ENST00000413321 391 ntBASIC19.74■□□□□ 0.75
MSI1O43347 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.74■□□□□ 0.75
MSI1O43347 KRT18P57-201ENST00000443599 1254 ntBASIC19.74■□□□□ 0.75
MSI1O43347 AP003041.3-201ENST00000527151 707 ntBASIC19.74■□□□□ 0.75
MSI1O43347 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.74■□□□□ 0.75
MSI1O43347 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MSI1O43347 AC010203.1-204ENST00000548782 407 ntBASIC19.74■□□□□ 0.75
MSI1O43347 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms