Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
NDUFS4O43181 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.25■□□□□ 0.51
NDUFS4O43181 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.25■□□□□ 0.51
NDUFS4O43181 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.25■□□□□ 0.51
NDUFS4O43181 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.25■□□□□ 0.51
NDUFS4O43181 DGCR10-201ENST00000609839 495 ntBASIC18.25■□□□□ 0.51
NDUFS4O43181 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.25■□□□□ 0.51
NDUFS4O43181 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.25■□□□□ 0.51
NDUFS4O43181 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
NDUFS4O43181 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
NDUFS4O43181 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.25■□□□□ 0.51
NDUFS4O43181 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFS4O43181 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS4O43181 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS4O43181 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
NDUFS4O43181 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS4O43181 KRT8P11-201ENST00000409686 1436 ntBASIC18.24■□□□□ 0.51
NDUFS4O43181 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS4O43181 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS4O43181 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS4O43181 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NDUFS4O43181 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.24■□□□□ 0.51
NDUFS4O43181 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS4O43181 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS4O43181 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.24■□□□□ 0.51
NDUFS4O43181 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.24■□□□□ 0.51
NDUFS4O43181 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
NDUFS4O43181 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS4O43181 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS4O43181 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS4O43181 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.24■□□□□ 0.51
NDUFS4O43181 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
NDUFS4O43181 FP475955.4-201ENST00000623131 1990 ntBASIC18.24■□□□□ 0.51
NDUFS4O43181 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.24■□□□□ 0.51
NDUFS4O43181 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.24■□□□□ 0.51
NDUFS4O43181 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS4O43181 AP000974.1-201ENST00000623909 2387 ntBASIC18.24■□□□□ 0.51
NDUFS4O43181 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFS4O43181 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NDUFS4O43181 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
NDUFS4O43181 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 AL049812.1-201ENST00000432563 2267 ntBASIC18.23■□□□□ 0.51
NDUFS4O43181 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.23■□□□□ 0.51
NDUFS4O43181 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.23■□□□□ 0.51
NDUFS4O43181 UNC93B2-201ENST00000285383 730 ntBASIC18.23■□□□□ 0.51
NDUFS4O43181 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NDUFS4O43181 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NDUFS4O43181 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFS4O43181 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NDUFS4O43181 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFS4O43181 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
NDUFS4O43181 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 AL355075.4-201ENST00000554988 638 ntBASIC18.23■□□□□ 0.51
NDUFS4O43181 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.23■□□□□ 0.51
NDUFS4O43181 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFS4O43181 AP000692.2-201ENST00000608391 879 ntBASIC18.23■□□□□ 0.51
NDUFS4O43181 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.23■□□□□ 0.51
NDUFS4O43181 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NDUFS4O43181 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NDUFS4O43181 AC087289.5-201ENST00000586076 3175 ntBASIC18.23■□□□□ 0.51
NDUFS4O43181 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NDUFS4O43181 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS4O43181 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFS4O43181 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.22■□□□□ 0.51
NDUFS4O43181 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
NDUFS4O43181 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.22■□□□□ 0.51
NDUFS4O43181 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NDUFS4O43181 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.22■□□□□ 0.51
NDUFS4O43181 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.22■□□□□ 0.51
NDUFS4O43181 RBM17P1-201ENST00000453646 1190 ntBASIC18.22■□□□□ 0.51
NDUFS4O43181 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.22■□□□□ 0.51
NDUFS4O43181 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.22■□□□□ 0.51
NDUFS4O43181 PRSS44-201ENST00000515154 1146 ntBASIC18.22■□□□□ 0.51
NDUFS4O43181 SLC25A1P4-201ENST00000567977 778 ntBASIC18.22■□□□□ 0.51
NDUFS4O43181 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.22■□□□□ 0.51
NDUFS4O43181 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.22■□□□□ 0.51
NDUFS4O43181 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.22■□□□□ 0.51
NDUFS4O43181 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms