Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC3O15379 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC3O15379 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC3O15379 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC3O15379 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HDAC3O15379 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HDAC3O15379 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC3O15379 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC3O15379 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC3O15379 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC3O15379 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC3O15379 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC3O15379 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HDAC3O15379 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC3O15379 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
HDAC3O15379 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.54■□□□□ 0.56
HDAC3O15379 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.54■□□□□ 0.56
HDAC3O15379 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC3O15379 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.54■□□□□ 0.56
HDAC3O15379 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.54■□□□□ 0.56
HDAC3O15379 AC068880.1-201ENST00000507289 2297 ntBASIC18.54■□□□□ 0.56
HDAC3O15379 ABALON-201ENST00000629058 1903 ntBASIC18.54■□□□□ 0.56
HDAC3O15379 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.54■□□□□ 0.56
HDAC3O15379 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC3O15379 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC3O15379 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC3O15379 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC3O15379 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC3O15379 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
HDAC3O15379 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC3O15379 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.53■□□□□ 0.56
HDAC3O15379 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC3O15379 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HDAC3O15379 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HDAC3O15379 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC3O15379 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC3O15379 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC3O15379 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.53■□□□□ 0.56
HDAC3O15379 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.53■□□□□ 0.56
HDAC3O15379 TUBB8P6-201ENST00000436895 1288 ntBASIC18.53■□□□□ 0.56
HDAC3O15379 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC3O15379 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.53■□□□□ 0.56
HDAC3O15379 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.53■□□□□ 0.56
HDAC3O15379 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.53■□□□□ 0.56
HDAC3O15379 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC3O15379 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC3O15379 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC3O15379 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC3O15379 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.53■□□□□ 0.56
HDAC3O15379 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC3O15379 AC073592.3-201ENST00000625118 1834 ntBASIC18.53■□□□□ 0.56
HDAC3O15379 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HDAC3O15379 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.53■□□□□ 0.56
HDAC3O15379 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC3O15379 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.52■□□□□ 0.56
HDAC3O15379 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
HDAC3O15379 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HDAC3O15379 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.52■□□□□ 0.56
HDAC3O15379 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.52■□□□□ 0.56
HDAC3O15379 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
HDAC3O15379 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.52■□□□□ 0.56
HDAC3O15379 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HDAC3O15379 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.52■□□□□ 0.56
HDAC3O15379 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.52■□□□□ 0.56
HDAC3O15379 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.52■□□□□ 0.56
HDAC3O15379 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
HDAC3O15379 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.52■□□□□ 0.56
HDAC3O15379 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC3O15379 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.52■□□□□ 0.56
HDAC3O15379 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HDAC3O15379 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HDAC3O15379 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HDAC3O15379 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HDAC3O15379 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
HDAC3O15379 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HDAC3O15379 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.55
HDAC3O15379 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
HDAC3O15379 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC3O15379 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC3O15379 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.51■□□□□ 0.55
HDAC3O15379 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC3O15379 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC3O15379 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC3O15379 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.51■□□□□ 0.55
HDAC3O15379 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
HDAC3O15379 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC3O15379 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms