Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.37■□□□□ 0.53
CDX4O14627 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDX4O14627 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDX4O14627 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDX4O14627 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDX4O14627 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
CDX4O14627 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.37■□□□□ 0.53
CDX4O14627 AP005212.1-201ENST00000581547 1997 ntBASIC18.37■□□□□ 0.53
CDX4O14627 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.37■□□□□ 0.53
CDX4O14627 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDX4O14627 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDX4O14627 AC026310.3-201ENST00000625186 2373 ntBASIC18.37■□□□□ 0.53
CDX4O14627 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDX4O14627 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDX4O14627 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDX4O14627 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDX4O14627 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CDX4O14627 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDX4O14627 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDX4O14627 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDX4O14627 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDX4O14627 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.36■□□□□ 0.53
CDX4O14627 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.36■□□□□ 0.53
CDX4O14627 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDX4O14627 LINC00167-201ENST00000530583 1419 ntBASIC18.36■□□□□ 0.53
CDX4O14627 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.36■□□□□ 0.53
CDX4O14627 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.36■□□□□ 0.53
CDX4O14627 AC233702.3-201ENST00000578656 1387 ntBASIC18.36■□□□□ 0.53
CDX4O14627 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDX4O14627 AC099336.1-202ENST00000602961 463 ntBASIC18.36■□□□□ 0.53
CDX4O14627 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDX4O14627 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.36■□□□□ 0.53
CDX4O14627 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDX4O14627 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.36■□□□□ 0.53
CDX4O14627 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDX4O14627 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.35■□□□□ 0.53
CDX4O14627 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDX4O14627 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.35■□□□□ 0.53
CDX4O14627 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.35■□□□□ 0.53
CDX4O14627 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.35■□□□□ 0.53
CDX4O14627 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 RNA5SP419-201ENST00000515908 135 ntBASIC18.35■□□□□ 0.53
CDX4O14627 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDX4O14627 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.35■□□□□ 0.53
CDX4O14627 AC005332.3-201ENST00000589904 676 ntBASIC18.35■□□□□ 0.53
CDX4O14627 IGHV3-41-201ENST00000613121 348 ntBASIC18.35■□□□□ 0.53
CDX4O14627 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.35■□□□□ 0.53
CDX4O14627 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDX4O14627 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDX4O14627 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.34■□□□□ 0.53
CDX4O14627 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDX4O14627 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDX4O14627 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.34■□□□□ 0.53
CDX4O14627 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDX4O14627 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.34■□□□□ 0.53
CDX4O14627 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDX4O14627 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDX4O14627 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.34■□□□□ 0.53
CDX4O14627 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.34■□□□□ 0.53
CDX4O14627 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.34■□□□□ 0.53
CDX4O14627 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.34■□□□□ 0.53
CDX4O14627 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.34■□□□□ 0.53
CDX4O14627 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.34■□□□□ 0.53
CDX4O14627 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDX4O14627 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.34■□□□□ 0.53
CDX4O14627 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.34■□□□□ 0.53
CDX4O14627 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDX4O14627 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.34■□□□□ 0.53
CDX4O14627 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.34■□□□□ 0.53
CDX4O14627 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CDX4O14627 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDX4O14627 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.33■□□□□ 0.53
CDX4O14627 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDX4O14627 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDX4O14627 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDX4O14627 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDX4O14627 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDX4O14627 IL9RP2-201ENST00000423948 1312 ntBASIC18.33■□□□□ 0.53
CDX4O14627 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.33■□□□□ 0.53
CDX4O14627 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CDX4O14627 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDX4O14627 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDX4O14627 IGHV3-47-201ENST00000425060 335 ntBASIC18.33■□□□□ 0.52
CDX4O14627 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.33■□□□□ 0.52
CDX4O14627 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.33■□□□□ 0.52
CDX4O14627 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CDX4O14627 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.33■□□□□ 0.52
CDX4O14627 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms