Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN4O14493 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN4O14493 MFAP1P1-201ENST00000442257 1255 ntBASIC17.95■□□□□ 0.46
CLDN4O14493 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN4O14493 FITM1-202ENST00000559294 800 ntBASIC17.95■□□□□ 0.46
CLDN4O14493 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN4O14493 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN4O14493 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN4O14493 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN4O14493 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLDN4O14493 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN4O14493 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN4O14493 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN4O14493 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN4O14493 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN4O14493 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN4O14493 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN4O14493 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN4O14493 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN4O14493 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN4O14493 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN4O14493 TEX21P-204ENST00000641479 1693 ntBASIC17.94■□□□□ 0.46
CLDN4O14493 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN4O14493 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN4O14493 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN4O14493 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN4O14493 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.94■□□□□ 0.46
CLDN4O14493 BX088651.1-201ENST00000540551 451 ntBASIC17.94■□□□□ 0.46
CLDN4O14493 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLDN4O14493 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.94■□□□□ 0.46
CLDN4O14493 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN4O14493 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN4O14493 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN4O14493 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN4O14493 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN4O14493 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CLDN4O14493 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN4O14493 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN4O14493 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN4O14493 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN4O14493 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN4O14493 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN4O14493 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN4O14493 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLDN4O14493 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN4O14493 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN4O14493 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN4O14493 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CLDN4O14493 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN4O14493 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.93■□□□□ 0.46
CLDN4O14493 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN4O14493 C2orf69P3-201ENST00000565542 1120 ntBASIC17.93■□□□□ 0.46
CLDN4O14493 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CLDN4O14493 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN4O14493 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLDN4O14493 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN4O14493 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN4O14493 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN4O14493 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN4O14493 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLDN4O14493 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN4O14493 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN4O14493 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN4O14493 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN4O14493 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN4O14493 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CLDN4O14493 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.92■□□□□ 0.46
CLDN4O14493 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN4O14493 TSPY15P-201ENST00000457163 923 ntBASIC17.92■□□□□ 0.46
CLDN4O14493 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN4O14493 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN4O14493 AC073912.3-201ENST00000624414 853 ntBASIC17.92■□□□□ 0.46
CLDN4O14493 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN4O14493 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.92■□□□□ 0.46
CLDN4O14493 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.92■□□□□ 0.46
CLDN4O14493 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN4O14493 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN4O14493 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN4O14493 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN4O14493 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLDN4O14493 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN4O14493 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLDN4O14493 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms