Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 AC096733.2-201ENST00000609937 1394 ntBASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 AC093503.3-201ENST00000624917 2352 ntBASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 HLA-A-209ENST00000638375 975 ntBASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 TCF3P1-201ENST00000423021 1937 ntBASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMX2-CTNND1H3BSU7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 MFAP1P1-201ENST00000442257 1255 ntBASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 FAM87A-204ENST00000613235 858 ntBASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 AC006011.2-201ENST00000621313 1158 ntBASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMX2-CTNND1H3BSU7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 TSPY17P-201ENST00000450329 467 ntBASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
TMX2-CTNND1H3BSU7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms