Protein–RNA interactions for Protein: A8MTJ6

FOXI3, Forkhead box protein I3, humanhuman

Predicted RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXI3A8MTJ6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 AC097658.1-201ENST00000475555 843 ntBASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 MIR4758-201ENST00000577688 71 ntBASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 AL137784.2-201ENST00000607332 1000 ntBASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 AC083880.1-201ENST00000608266 535 ntBASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXI3A8MTJ6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 AL133373.2-201ENST00000623187 2828 ntBASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 ABALON-201ENST00000629058 1903 ntBASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXI3A8MTJ6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 AC005332.8-201ENST00000622750 2735 ntBASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 SLC29A4P1-201ENST00000398760 971 ntBASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 NCF1B-203ENST00000435988 1254 ntBASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 AC006970.2-201ENST00000450065 779 ntBASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 SOX15-203ENST00000570788 1093 ntBASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 AC008687.6-201ENST00000596318 630 ntBASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 HLA-A-209ENST00000638375 975 ntBASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXI3A8MTJ6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 AC068880.1-201ENST00000507289 2297 ntBASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 AC126763.1-201ENST00000552015 2118 ntBASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
FOXI3A8MTJ6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms