Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM235A6NFC5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TMEM235A6NFC5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM235A6NFC5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM235A6NFC5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM235A6NFC5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM235A6NFC5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TMEM235A6NFC5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM235A6NFC5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.27■□□□□ 0.19
TMEM235A6NFC5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TMEM235A6NFC5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM235A6NFC5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM235A6NFC5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM235A6NFC5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TMEM235A6NFC5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 LSM12P1-201ENST00000411836 588 ntBASIC16.26■□□□□ 0.19
TMEM235A6NFC5 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.26■□□□□ 0.19
TMEM235A6NFC5 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM235A6NFC5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.25■□□□□ 0.19
TMEM235A6NFC5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 AC007322.1-201ENST00000426983 750 ntBASIC16.25■□□□□ 0.19
TMEM235A6NFC5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 AC231657.2-201ENST00000624556 255 ntBASIC16.25■□□□□ 0.19
TMEM235A6NFC5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 FEM1AP3-201ENST00000403722 1741 ntBASIC16.25■□□□□ 0.19
TMEM235A6NFC5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TMEM235A6NFC5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms