Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AL109659.2-201ENST00000606809 1674 ntBASIC28.19■■■□□ 2.1
HFM1A2PYH4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
HFM1A2PYH4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC28.19■■■□□ 2.1
HFM1A2PYH4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
HFM1A2PYH4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC28.19■■■□□ 2.1
HFM1A2PYH4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC28.19■■■□□ 2.1
HFM1A2PYH4 RCC2P3-201ENST00000418112 1537 ntBASIC28.19■■■□□ 2.1
HFM1A2PYH4 AL161938.1-201ENST00000569833 2180 ntBASIC28.19■■■□□ 2.1
HFM1A2PYH4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
HFM1A2PYH4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HFM1A2PYH4 MCCD1P1-208ENST00000445732 328 ntBASIC28.18■■■□□ 2.1
HFM1A2PYH4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
HFM1A2PYH4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
HFM1A2PYH4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
HFM1A2PYH4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 AC116562.4-201ENST00000641316 2276 ntBASIC28.18■■■□□ 2.1
HFM1A2PYH4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
HFM1A2PYH4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 ARMC10P1-201ENST00000313754 855 ntBASIC28.18■■■□□ 2.1
HFM1A2PYH4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
HFM1A2PYH4 AK4P3-201ENST00000418260 669 ntBASIC28.18■■■□□ 2.1
HFM1A2PYH4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
HFM1A2PYH4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
HFM1A2PYH4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC28.17■■■□□ 2.1
HFM1A2PYH4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC28.17■■■□□ 2.1
HFM1A2PYH4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
HFM1A2PYH4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC28.17■■■□□ 2.1
HFM1A2PYH4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC28.17■■■□□ 2.1
HFM1A2PYH4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
HFM1A2PYH4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
HFM1A2PYH4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC28.17■■■□□ 2.1
HFM1A2PYH4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC28.17■■■□□ 2.1
HFM1A2PYH4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
HFM1A2PYH4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
HFM1A2PYH4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
HFM1A2PYH4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
HFM1A2PYH4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
HFM1A2PYH4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HFM1A2PYH4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
HFM1A2PYH4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HFM1A2PYH4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HFM1A2PYH4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
HFM1A2PYH4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HFM1A2PYH4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC28.16■■■□□ 2.1
HFM1A2PYH4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HFM1A2PYH4 AC068587.9-201ENST00000641814 219 ntBASIC28.16■■■□□ 2.1
HFM1A2PYH4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HFM1A2PYH4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC28.16■■■□□ 2.1
HFM1A2PYH4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HFM1A2PYH4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HFM1A2PYH4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HFM1A2PYH4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HFM1A2PYH4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HFM1A2PYH4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
HFM1A2PYH4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC28.15■■■□□ 2.1
HFM1A2PYH4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
HFM1A2PYH4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
HFM1A2PYH4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.1
HFM1A2PYH4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
HFM1A2PYH4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
HFM1A2PYH4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.1
HFM1A2PYH4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
HFM1A2PYH4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC28.14■■■□□ 2.1
HFM1A2PYH4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
HFM1A2PYH4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
HFM1A2PYH4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
HFM1A2PYH4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
HFM1A2PYH4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
HFM1A2PYH4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC28.14■■■□□ 2.1
HFM1A2PYH4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC28.14■■■□□ 2.1
HFM1A2PYH4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC28.14■■■□□ 2.1
HFM1A2PYH4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
HFM1A2PYH4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
HFM1A2PYH4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC28.14■■■□□ 2.09
HFM1A2PYH4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
HFM1A2PYH4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
HFM1A2PYH4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
HFM1A2PYH4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
HFM1A2PYH4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
HFM1A2PYH4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
HFM1A2PYH4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
HFM1A2PYH4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC28.13■■■□□ 2.09
HFM1A2PYH4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
HFM1A2PYH4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
HFM1A2PYH4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC28.13■■■□□ 2.09
HFM1A2PYH4 RNF152P1-201ENST00000397754 604 ntBASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms