Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 AL023875.1-201ENST00000640777 796 ntBASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV7S3A2A0A539 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 AC026366.1-201ENST00000488803 879 ntBASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV7S3A2A0A539 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 AC135050.7-201ENST00000624508 2218 ntBASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 ID1-201ENST00000376105 1233 ntBASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 TSPY21P-201ENST00000433481 731 ntBASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBV7S3A2A0A539 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms