Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 AC022616.7-201ENST00000525383 220 ntBASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 AL031432.5-201ENST00000641059 760 ntBASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM28A0A1B0GU29 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 FEM1AP3-201ENST00000403722 1741 ntBASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 AC141586.3-201ENST00000562166 1838 ntBASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 CR769767.2-201ENST00000622735 460 ntBASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 AL023973.1-201ENST00000624619 620 ntBASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 AC007952.6-201ENST00000573168 2673 ntBASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 AC003957.1-201ENST00000625108 2673 ntBASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM28A0A1B0GU29 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 IRX1P1-201ENST00000438849 1838 ntBASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 AL023284.2-201ENST00000405850 579 ntBASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 AC009947.2-201ENST00000444014 672 ntBASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 AC140113.3-201ENST00000605663 199 ntBASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 AL032819.2-201ENST00000624543 2162 ntBASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM28A0A1B0GU29 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms