Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 AL022342.1-201ENST00000400363 863 ntBASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 KRT18P31-201ENST00000506277 1292 ntBASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 AL732292.2-201ENST00000609649 430 ntBASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 AC004263.2-201ENST00000617183 678 ntBASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 AL157888.1-201ENST00000631930 593 ntBASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 ZNF815P-204ENST00000434898 1737 ntBASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC163A0A0D9SF12 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 KRT8P3-201ENST00000519669 1449 ntBASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 AP000867.3-201ENST00000524675 377 ntBASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 AP005212.1-201ENST00000581547 1997 ntBASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC163A0A0D9SF12 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC163A0A0D9SF12 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC163A0A0D9SF12 CLDN5-201ENST00000403084 2357 ntBASIC18.83■□□□□ 0.61
CCDC163A0A0D9SF12 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC163A0A0D9SF12 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC163A0A0D9SF12 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC163A0A0D9SF12 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC163A0A0D9SF12 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 LINC00265-3P-201ENST00000447588 903 ntBASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 AC090616.6-201ENST00000582640 721 ntBASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC163A0A0D9SF12 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC163A0A0D9SF12 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms