Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 AC024243.1-201ENST00000609234 778 ntBASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 GPAT2P1-201ENST00000444924 1672 ntBASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 AC011498.5-201ENST00000592027 486 ntBASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC187A0A096LP49 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 AC036111.1-201ENST00000533973 1582 ntBASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC187A0A096LP49 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC187A0A096LP49 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC187A0A096LP49 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC187A0A096LP49 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.02■□□□□ 0.47
CCDC187A0A096LP49 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC187A0A096LP49 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC187A0A096LP49 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC187A0A096LP49 AL162377.1-201ENST00000618844 1793 ntBASIC18.02■□□□□ 0.47
CCDC187A0A096LP49 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 RNF165-205ENST00000588679 2904 ntBASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 AL023284.2-201ENST00000405850 579 ntBASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 AC111152.3-201ENST00000569699 673 ntBASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CCDC187A0A096LP49 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC187A0A096LP49 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC187A0A096LP49 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC187A0A096LP49 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18■□□□□ 0.47
CCDC187A0A096LP49 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC187A0A096LP49 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC187A0A096LP49 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC187A0A096LP49 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CCDC187A0A096LP49 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms