Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 MIR5004-201ENST00000579078 107 ntBASIC4.01□□□□□ -1.77
ATP2B3Q16720 AC243960.4-201ENST00000600532 288 ntBASIC4.01□□□□□ -1.77
ATP2B3Q16720 AC087045.1-201ENST00000605856 382 ntBASIC4.01□□□□□ -1.77
ATP2B3Q16720 AC092807.2-201ENST00000609367 243 ntBASIC4.01□□□□□ -1.77
ATP2B3Q16720 uc_338.1-201ENST00000612113 180 ntBASIC4.01□□□□□ -1.77
ATP2B3Q16720 AL157817.1-201ENST00000614264 790 ntBASIC4.01□□□□□ -1.77
ATP2B3Q16720 AP001486.3-201ENST00000615334 372 ntBASIC4.01□□□□□ -1.77
ATP2B3Q16720 AC048347.1-201ENST00000624621 427 ntBASIC4.01□□□□□ -1.77
ATP2B3Q16720 TPTEP1-208ENST00000636884 213 ntBASIC4.01□□□□□ -1.77
ATP2B3Q16720 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATP2B3Q16720 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ATP2B3Q16720 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.01□□□□□ -1.77
ATP2B3Q16720 AC005183.1-201ENST00000603687 1979 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4□□□□□ -1.77
ATP2B3Q16720 RNA5SP374-201ENST00000362939 125 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 RNU6-1252P-201ENST00000363054 104 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 Y_RNA.167-201ENST00000363735 109 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATP2B3Q16720 CISD1P1-201ENST00000393907 327 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 RNU4-26P-201ENST00000410270 107 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 RNA5SP229-201ENST00000410809 99 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4□□□□□ -1.77
ATP2B3Q16720 AC009161.1-201ENST00000417306 376 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 CALM2P2-201ENST00000428512 440 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4□□□□□ -1.77
ATP2B3Q16720 VDAC1P3-201ENST00000434069 851 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 CYCSP32-201ENST00000440548 321 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 TRAPPC2P3-201ENST00000443200 321 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4□□□□□ -1.77
ATP2B3Q16720 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4□□□□□ -1.77
ATP2B3Q16720 AC007547.1-201ENST00000462177 490 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 MTND4P17-201ENST00000470444 350 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 GMPSP1-201ENST00000514075 579 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 RNU6-273P-201ENST00000516937 96 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 RNU6-1073P-201ENST00000517182 106 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 BNIP3P6-201ENST00000549284 499 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4□□□□□ -1.77
ATP2B3Q16720 AC009233.1-201ENST00000616477 371 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 Xist_exon1.1-201ENST00000618930 85 ntBASIC4□□□□□ -1.77
ATP2B3Q16720 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4□□□□□ -1.77
ATP2B3Q16720 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATP2B3Q16720 TPTE2P4-201ENST00000258589 1605 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ATP2B3Q16720 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.99□□□□□ -1.77
ATP2B3Q16720 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATP2B3Q16720 Y_RNA.11-201ENST00000362375 109 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 Y_RNA.166-201ENST00000363730 102 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
ATP2B3Q16720 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
ATP2B3Q16720 RNU4-47P-201ENST00000410876 114 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 MTND3P8-201ENST00000412909 339 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.99□□□□□ -1.77
ATP2B3Q16720 AL365400.1-201ENST00000431854 640 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 RPL36AP6-201ENST00000435770 321 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.99□□□□□ -1.77
ATP2B3Q16720 AC125238.1-201ENST00000448842 249 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 RPL23AP62-201ENST00000463396 453 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 RPL21P8-201ENST00000465083 535 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 VN1R17P-201ENST00000472048 1090 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 AC109925.1-201ENST00000478069 331 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 AC092451.1-201ENST00000480211 153 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 RPL21P93-201ENST00000480465 489 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 AC108860.1-201ENST00000484521 383 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 AP001086.1-201ENST00000494882 321 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 AP001804.3-201ENST00000525146 880 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.99□□□□□ -1.77
ATP2B3Q16720 PSMA3P-201ENST00000555485 635 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.99□□□□□ -1.77
ATP2B3Q16720 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.99□□□□□ -1.77
ATP2B3Q16720 VN1R80P-201ENST00000597126 338 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 AC013553.2-201ENST00000604244 589 ntBASIC3.99□□□□□ -1.77
ATP2B3Q16720 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.99□□□□□ -1.77
ATP2B3Q16720 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.99□□□□□ -1.77
ATP2B3Q16720 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.99□□□□□ -1.77
ATP2B3Q16720 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ATP2B3Q16720 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.99□□□□□ -1.77
ATP2B3Q16720 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.99□□□□□ -1.77
ATP2B3Q16720 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATP2B3Q16720 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATP2B3Q16720 SRP72P2-201ENST00000344851 1979 ntBASIC3.98□□□□□ -1.77
ATP2B3Q16720 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATP2B3Q16720 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.98□□□□□ -1.77
ATP2B3Q16720 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
ATP2B3Q16720 RNU6-805P-201ENST00000365643 106 ntBASIC3.98□□□□□ -1.77
ATP2B3Q16720 RN7SKP32-201ENST00000410167 303 ntBASIC3.98□□□□□ -1.77
ATP2B3Q16720 RNA5SP31-201ENST00000411144 127 ntBASIC3.98□□□□□ -1.77
ATP2B3Q16720 RNA5SP111-201ENST00000411386 101 ntBASIC3.98□□□□□ -1.77
ATP2B3Q16720 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATP2B3Q16720 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.98□□□□□ -1.77
ATP2B3Q16720 HMGB1P12-201ENST00000438594 598 ntBASIC3.98□□□□□ -1.77
ATP2B3Q16720 RNU7-66P-201ENST00000459469 62 ntBASIC3.98□□□□□ -1.77
ATP2B3Q16720 RNU6-329P-201ENST00000459618 107 ntBASIC3.98□□□□□ -1.77
ATP2B3Q16720 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.98□□□□□ -1.77
ATP2B3Q16720 AC021205.2-201ENST00000480069 347 ntBASIC3.98□□□□□ -1.77
ATP2B3Q16720 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.98□□□□□ -1.77
ATP2B3Q16720 MLLT10P2-201ENST00000506434 249 ntBASIC3.98□□□□□ -1.77
ATP2B3Q16720 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.98□□□□□ -1.77
ATP2B3Q16720 RNU6-685P-201ENST00000517088 95 ntBASIC3.98□□□□□ -1.77
ATP2B3Q16720 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.98□□□□□ -1.77
ATP2B3Q16720 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms