Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATN1P54259 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC6.1□□□□□ -1.43
ATN1P54259 AC010329.2-201ENST00000595195 2737 ntBASIC6.1□□□□□ -1.43
ATN1P54259 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATN1P54259 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.1□□□□□ -1.43
ATN1P54259 RN7SKP104-201ENST00000362605 328 ntBASIC6.1□□□□□ -1.43
ATN1P54259 RNU6-1249P-201ENST00000363237 111 ntBASIC6.1□□□□□ -1.43
ATN1P54259 RNU6-1141P-201ENST00000364520 107 ntBASIC6.1□□□□□ -1.43
ATN1P54259 SNORA18.3-201ENST00000384122 132 ntBASIC6.1□□□□□ -1.43
ATN1P54259 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ATN1P54259 Y_RNA.587-201ENST00000391210 103 ntBASIC6.1□□□□□ -1.43
ATN1P54259 RNA5SP31-201ENST00000411144 127 ntBASIC6.1□□□□□ -1.43
ATN1P54259 AC119751.6-201ENST00000416712 186 ntBASIC6.1□□□□□ -1.43
ATN1P54259 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.1□□□□□ -1.43
ATN1P54259 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC6.1□□□□□ -1.43
ATN1P54259 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.1□□□□□ -1.43
ATN1P54259 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC6.1□□□□□ -1.43
ATN1P54259 RNA5SP290-201ENST00000517133 127 ntBASIC6.1□□□□□ -1.43
ATN1P54259 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.1□□□□□ -1.43
ATN1P54259 FAM91A3P-201ENST00000456826 2544 ntBASIC6.1□□□□□ -1.43
ATN1P54259 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.1□□□□□ -1.43
ATN1P54259 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATN1P54259 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
ATN1P54259 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.1□□□□□ -1.43
ATN1P54259 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATN1P54259 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATN1P54259 AL138820.1-201ENST00000617901 5305 ntBASIC6.09□□□□□ -1.43
ATN1P54259 ASNSP1-201ENST00000518311 1939 ntBASIC6.09□□□□□ -1.43
ATN1P54259 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATN1P54259 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATN1P54259 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATN1P54259 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATN1P54259 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATN1P54259 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.09□□□□□ -1.43
ATN1P54259 Y_RNA.107-201ENST00000363190 121 ntBASIC6.09□□□□□ -1.43
ATN1P54259 SNORD8-201ENST00000363915 110 ntBASIC6.09□□□□□ -1.43
ATN1P54259 RNU1-140P-201ENST00000365040 165 ntBASIC6.09□□□□□ -1.43
ATN1P54259 RNU6-484P-201ENST00000384016 107 ntBASIC6.09□□□□□ -1.43
ATN1P54259 AL357515.1-201ENST00000402967 542 ntBASIC6.09□□□□□ -1.43
ATN1P54259 SNORA36B-201ENST00000410438 131 ntBASIC6.09□□□□□ -1.43
ATN1P54259 AC007568.1-201ENST00000422912 471 ntBASIC6.09□□□□□ -1.43
ATN1P54259 RPL23AP62-201ENST00000463396 453 ntBASIC6.09□□□□□ -1.43
ATN1P54259 AC009127.1-201ENST00000467090 155 ntBASIC6.09□□□□□ -1.43
ATN1P54259 SNRPGP7-201ENST00000469016 106 ntBASIC6.09□□□□□ -1.43
ATN1P54259 AC090602.1-201ENST00000469695 252 ntBASIC6.09□□□□□ -1.43
ATN1P54259 RPS20P22-201ENST00000473700 357 ntBASIC6.09□□□□□ -1.43
ATN1P54259 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATN1P54259 RN7SL459P-201ENST00000481078 302 ntBASIC6.09□□□□□ -1.43
ATN1P54259 IGLV2-34-201ENST00000490007 283 ntBASIC6.09□□□□□ -1.43
ATN1P54259 AC008897.1-201ENST00000494006 347 ntBASIC6.09□□□□□ -1.43
ATN1P54259 RNU6-904P-201ENST00000516206 101 ntBASIC6.09□□□□□ -1.43
ATN1P54259 SCARNA16.4-201ENST00000516956 187 ntBASIC6.09□□□□□ -1.43
ATN1P54259 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
ATN1P54259 AC025946.2-201ENST00000603398 234 ntBASIC6.09□□□□□ -1.43
ATN1P54259 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC6.09□□□□□ -1.43
ATN1P54259 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
ATN1P54259 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.09□□□□□ -1.43
ATN1P54259 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATN1P54259 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATN1P54259 AL121839.2-201ENST00000565058 6943 ntBASIC6.09□□□□□ -1.43
ATN1P54259 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATN1P54259 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.09□□□□□ -1.43
ATN1P54259 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
ATN1P54259 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.09□□□□□ -1.43
ATN1P54259 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATN1P54259 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.09□□□□□ -1.43
ATN1P54259 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATN1P54259 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
ATN1P54259 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.09□□□□□ -1.44
ATN1P54259 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ATN1P54259 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
ATN1P54259 AC073073.2-201ENST00000609827 2578 ntBASIC6.09□□□□□ -1.44
ATN1P54259 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.09□□□□□ -1.44
ATN1P54259 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATN1P54259 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.08□□□□□ -1.44
ATN1P54259 AC144833.1-201ENST00000567953 4089 ntBASIC6.08□□□□□ -1.44
ATN1P54259 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATN1P54259 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ATN1P54259 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
ATN1P54259 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
ATN1P54259 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ATN1P54259 AP002512.4-202ENST00000641599 4530 ntBASIC6.08□□□□□ -1.44
ATN1P54259 Y_RNA.52-201ENST00000362760 96 ntBASIC6.08□□□□□ -1.44
ATN1P54259 RNU6-799P-201ENST00000363567 107 ntBASIC6.08□□□□□ -1.44
ATN1P54259 RNU6-1240P-201ENST00000365155 104 ntBASIC6.08□□□□□ -1.44
ATN1P54259 AL009179.1-201ENST00000406085 265 ntBASIC6.08□□□□□ -1.44
ATN1P54259 MIR320B2-201ENST00000408479 138 ntBASIC6.08□□□□□ -1.44
ATN1P54259 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC6.08□□□□□ -1.44
ATN1P54259 AC012306.1-201ENST00000423267 114 ntBASIC6.08□□□□□ -1.44
ATN1P54259 AC078809.1-201ENST00000427601 140 ntBASIC6.08□□□□□ -1.44
ATN1P54259 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.08□□□□□ -1.44
ATN1P54259 TDGF1P1-201ENST00000445734 527 ntBASIC6.08□□□□□ -1.44
ATN1P54259 AL049874.1-201ENST00000489560 388 ntBASIC6.08□□□□□ -1.44
ATN1P54259 AL035690.1-201ENST00000490892 383 ntBASIC6.08□□□□□ -1.44
ATN1P54259 RPL30P5-201ENST00000494923 336 ntBASIC6.08□□□□□ -1.44
ATN1P54259 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC6.08□□□□□ -1.44
ATN1P54259 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.08□□□□□ -1.44
ATN1P54259 MIR548AY-201ENST00000617669 107 ntBASIC6.08□□□□□ -1.44
ATN1P54259 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.08□□□□□ -1.44
ATN1P54259 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms