Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.28□□□□□ -2.04
CASP4P49662 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.28□□□□□ -2.04
CASP4P49662 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.28□□□□□ -2.04
CASP4P49662 USP9YP8-201ENST00000441913 500 ntBASIC2.28□□□□□ -2.04
CASP4P49662 AC096638.1-201ENST00000444678 216 ntBASIC2.28□□□□□ -2.04
CASP4P49662 RPL23AP7-203ENST00000449021 469 ntBASIC2.28□□□□□ -2.04
CASP4P49662 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.28□□□□□ -2.04
CASP4P49662 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.28□□□□□ -2.04
CASP4P49662 RNU6-953P-201ENST00000459154 107 ntBASIC2.28□□□□□ -2.04
CASP4P49662 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.28□□□□□ -2.04
CASP4P49662 RNU6-143P-201ENST00000516942 93 ntBASIC2.28□□□□□ -2.04
CASP4P49662 RNU6-703P-201ENST00000516946 107 ntBASIC2.28□□□□□ -2.04
CASP4P49662 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.28□□□□□ -2.04
CASP4P49662 BTF3P12-201ENST00000519620 469 ntBASIC2.28□□□□□ -2.04
CASP4P49662 AP006587.4-201ENST00000526053 529 ntBASIC2.28□□□□□ -2.04
CASP4P49662 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.28□□□□□ -2.04
CASP4P49662 MIR1273D-201ENST00000577266 86 ntBASIC2.28□□□□□ -2.04
CASP4P49662 MIR5694-201ENST00000581190 76 ntBASIC2.28□□□□□ -2.04
CASP4P49662 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.28□□□□□ -2.04
CASP4P49662 AP000811.1-201ENST00000603803 651 ntBASIC2.28□□□□□ -2.04
CASP4P49662 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.28□□□□□ -2.04
CASP4P49662 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.28□□□□□ -2.04
CASP4P49662 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
CASP4P49662 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.28□□□□□ -2.04
CASP4P49662 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.28□□□□□ -2.04
CASP4P49662 HMGB1P24-202ENST00000615653 685 ntBASIC2.28□□□□□ -2.04
CASP4P49662 AC021755.4-201ENST00000616620 456 ntBASIC2.28□□□□□ -2.04
CASP4P49662 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.28□□□□□ -2.04
CASP4P49662 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.28□□□□□ -2.04
CASP4P49662 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CASP4P49662 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.27□□□□□ -2.05
CASP4P49662 NACAP2-201ENST00000318548 624 ntBASIC2.27□□□□□ -2.05
CASP4P49662 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.27□□□□□ -2.05
CASP4P49662 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CASP4P49662 Y_RNA.46-201ENST00000362695 102 ntBASIC2.27□□□□□ -2.05
CASP4P49662 SNORA38-201ENST00000363946 132 ntBASIC2.27□□□□□ -2.05
CASP4P49662 SNORA6-201ENST00000384033 151 ntBASIC2.27□□□□□ -2.05
CASP4P49662 RNU6-701P-201ENST00000384059 107 ntBASIC2.27□□□□□ -2.05
CASP4P49662 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CASP4P49662 RNA5SP425-201ENST00000410336 112 ntBASIC2.27□□□□□ -2.05
CASP4P49662 RNU4-72P-201ENST00000410754 173 ntBASIC2.27□□□□□ -2.05
CASP4P49662 RNU6-1328P-201ENST00000410938 106 ntBASIC2.27□□□□□ -2.05
CASP4P49662 AC078974.1-201ENST00000411597 223 ntBASIC2.27□□□□□ -2.05
CASP4P49662 RPL23AP39-201ENST00000415533 405 ntBASIC2.27□□□□□ -2.05
CASP4P49662 RAC1P6-201ENST00000423911 575 ntBASIC2.27□□□□□ -2.05
CASP4P49662 MTCO3P30-201ENST00000426425 670 ntBASIC2.27□□□□□ -2.05
CASP4P49662 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.27□□□□□ -2.05
CASP4P49662 WARS2P1-201ENST00000429678 537 ntBASIC2.27□□□□□ -2.05
CASP4P49662 UBE2D3P1-201ENST00000436669 444 ntBASIC2.27□□□□□ -2.05
CASP4P49662 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CASP4P49662 AL161651.1-201ENST00000440882 223 ntBASIC2.27□□□□□ -2.05
CASP4P49662 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.27□□□□□ -2.05
CASP4P49662 IPO7P1-201ENST00000442031 636 ntBASIC2.27□□□□□ -2.05
CASP4P49662 NEFMP1-201ENST00000443423 1006 ntBASIC2.27□□□□□ -2.05
CASP4P49662 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.27□□□□□ -2.05
CASP4P49662 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.27□□□□□ -2.05
CASP4P49662 OR6C5P-201ENST00000452388 923 ntBASIC2.27□□□□□ -2.05
CASP4P49662 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.27□□□□□ -2.05
CASP4P49662 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.27□□□□□ -2.05
CASP4P49662 RNU6-1003P-201ENST00000517099 105 ntBASIC2.27□□□□□ -2.05
CASP4P49662 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.27□□□□□ -2.05
CASP4P49662 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.27□□□□□ -2.05
CASP4P49662 AP000889.1-201ENST00000530968 660 ntBASIC2.27□□□□□ -2.05
CASP4P49662 AC006199.1-201ENST00000548728 219 ntBASIC2.27□□□□□ -2.05
CASP4P49662 ISCA1P3-201ENST00000577104 373 ntBASIC2.27□□□□□ -2.05
CASP4P49662 MIR3167-201ENST00000579623 85 ntBASIC2.27□□□□□ -2.05
CASP4P49662 MIR3146-201ENST00000580367 79 ntBASIC2.27□□□□□ -2.05
CASP4P49662 MIR4513-201ENST00000581077 86 ntBASIC2.27□□□□□ -2.05
CASP4P49662 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.27□□□□□ -2.05
CASP4P49662 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.27□□□□□ -2.05
CASP4P49662 AC018714.1-201ENST00000605028 208 ntBASIC2.27□□□□□ -2.05
CASP4P49662 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.27□□□□□ -2.05
CASP4P49662 uc_338.14-201ENST00000613162 166 ntBASIC2.27□□□□□ -2.05
CASP4P49662 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
CASP4P49662 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.26□□□□□ -2.05
CASP4P49662 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CASP4P49662 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CASP4P49662 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.26□□□□□ -2.05
CASP4P49662 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CASP4P49662 U8.14-201ENST00000390843 143 ntBASIC2.26□□□□□ -2.05
CASP4P49662 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.26□□□□□ -2.05
CASP4P49662 USP9YP6-201ENST00000413550 854 ntBASIC2.26□□□□□ -2.05
CASP4P49662 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.26□□□□□ -2.05
CASP4P49662 Z98742.2-201ENST00000431564 187 ntBASIC2.26□□□□□ -2.05
CASP4P49662 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.26□□□□□ -2.05
CASP4P49662 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.26□□□□□ -2.05
CASP4P49662 PGBD4P3-201ENST00000440731 581 ntBASIC2.26□□□□□ -2.05
CASP4P49662 AL606662.1-201ENST00000445763 553 ntBASIC2.26□□□□□ -2.05
CASP4P49662 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.26□□□□□ -2.05
CASP4P49662 IFNA11P-201ENST00000446352 526 ntBASIC2.26□□□□□ -2.05
CASP4P49662 AL353705.4-201ENST00000449661 238 ntBASIC2.26□□□□□ -2.05
CASP4P49662 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.26□□□□□ -2.05
CASP4P49662 TRBV12-1-201ENST00000479785 344 ntBASIC2.26□□□□□ -2.05
CASP4P49662 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CASP4P49662 AC109486.1-201ENST00000486833 374 ntBASIC2.26□□□□□ -2.05
CASP4P49662 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.26□□□□□ -2.05
CASP4P49662 SCARNA3-201ENST00000517097 143 ntBASIC2.26□□□□□ -2.05
CASP4P49662 RNU6-201P-201ENST00000517100 61 ntBASIC2.26□□□□□ -2.05
CASP4P49662 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
CASP4P49662 IGKV3-31-201ENST00000523109 329 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms