Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RN7SL441P-201ENST00000492388 296 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 RNU6-1198P-201ENST00000516904 67 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 AP006289.1-201ENST00000538089 277 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 UBL5P4-201ENST00000562584 236 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 AL133393.1-201ENST00000603277 287 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 AC090132.2-201ENST00000615881 347 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 AP000346.3-201ENST00000622821 210 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 CR381572.2-201ENST00000624852 397 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA2O43364 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA2O43364 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA2O43364 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA2O43364 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA2O43364 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA2O43364 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA2O43364 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA2O43364 AC025031.4-201ENST00000621248 3271 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA2O43364 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA2O43364 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA2O43364 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.4□□□□□ -1.54
HOXA2O43364 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA2O43364 Y_RNA.215-201ENST00000364204 112 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 U3.15-201ENST00000365398 212 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 RNU11-201ENST00000387069 134 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 RNU6-159P-201ENST00000391080 106 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA2O43364 RNA5SP31-201ENST00000411144 127 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXA2O43364 H2AFZP5-201ENST00000446960 382 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 AC009237.7-201ENST00000447357 229 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA2O43364 IGLV2-34-201ENST00000490007 283 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXA2O43364 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA2O43364 AC098976.1-201ENST00000513014 541 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 ENPP7P9-201ENST00000514456 627 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA2O43364 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA2O43364 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA2O43364 AL360012.1-201ENST00000602813 131 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.4□□□□□ -1.54
HOXA2O43364 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA2O43364 AL445487.1-201ENST00000415694 1580 ntBASIC5.4□□□□□ -1.55
HOXA2O43364 SAMMSON-226ENST00000642089 1582 ntBASIC5.4□□□□□ -1.55
HOXA2O43364 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA2O43364 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
HOXA2O43364 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA2O43364 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.4□□□□□ -1.55
HOXA2O43364 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA2O43364 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA2O43364 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA2O43364 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HOXA2O43364 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA2O43364 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HOXA2O43364 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HOXA2O43364 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXA2O43364 RNU6-653P-201ENST00000363074 106 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 RNU6-312P-201ENST00000364629 107 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 OR1L6-202ENST00000373684 1044 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 RNU6-629P-201ENST00000384061 103 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 U8.10-201ENST00000384260 133 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 RNU6-658P-201ENST00000384606 106 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXA2O43364 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXA2O43364 AC008267.6-201ENST00000441664 139 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 AC243964.1-201ENST00000441814 261 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.39□□□□□ -1.55
HOXA2O43364 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXA2O43364 RN7SL346P-201ENST00000491561 294 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 AC091874.1-201ENST00000511402 339 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 TRAV28-201ENST00000557548 323 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXA2O43364 RNA5SP108-201ENST00000605921 117 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 AC024581.2-201ENST00000619986 252 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 AC008079.2-201ENST00000623543 20396 ntBASIC5.39□□□□□ -1.55
HOXA2O43364 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXA2O43364 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA2O43364 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA2O43364 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA2O43364 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXA2O43364 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXA2O43364 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
HOXA2O43364 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA2O43364 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXA2O43364 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HOXA2O43364 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA2O43364 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA2O43364 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA2O43364 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA2O43364 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA2O43364 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA2O43364 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA2O43364 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HOXA2O43364 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA2O43364 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA2O43364 RNU5B-2P-201ENST00000363036 113 ntBASIC5.38□□□□□ -1.55
HOXA2O43364 Y_RNA.357-201ENST00000365487 109 ntBASIC5.38□□□□□ -1.55
HOXA2O43364 RNU6-211P-201ENST00000384047 107 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms