Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.25□□□□□ -1.73
RFXAPO00287 CYCSP27-201ENST00000527643 293 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFXAPO00287 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFXAPO00287 RPL23AP87-202ENST00000573039 466 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 AC010620.2-201ENST00000600135 313 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 AL713866.2-201ENST00000603579 219 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 MIR432-201ENST00000606207 94 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFXAPO00287 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RFXAPO00287 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFXAPO00287 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RFXAPO00287 AC087190.4-201ENST00000574616 8334 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 EOGT-210ENST00000615922 1931 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFXAPO00287 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RFXAPO00287 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RFXAPO00287 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFXAPO00287 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFXAPO00287 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFXAPO00287 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RFXAPO00287 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RFXAPO00287 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFXAPO00287 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFXAPO00287 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.24□□□□□ -1.73
RFXAPO00287 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFXAPO00287 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RFXAPO00287 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RFXAPO00287 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
RFXAPO00287 Y_RNA.84-201ENST00000363011 104 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 SNORD35B-201ENST00000363660 87 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 RNU6-1284P-201ENST00000363701 100 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 Y_RNA.506-201ENST00000384494 102 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 SAR1AP2-201ENST00000392696 594 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 MIR1179-201ENST00000408703 91 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 RNU6-174P-201ENST00000410406 106 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 RNU6-1203P-201ENST00000410703 110 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 RNA5SP146-201ENST00000410743 123 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.24□□□□□ -1.73
RFXAPO00287 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.24□□□□□ -1.73
RFXAPO00287 AL121871.1-201ENST00000443413 436 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 AL589765.3-201ENST00000446084 462 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 AC010655.1-201ENST00000449336 292 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.24□□□□□ -1.73
RFXAPO00287 AC010631.1-201ENST00000474150 156 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 RPS27AP1-201ENST00000475545 471 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 MED28P2-201ENST00000475771 317 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 RPL21P103-201ENST00000479921 488 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 Y_RNA.703-201ENST00000516846 111 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 AC004024.1-201ENST00000549244 247 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RFXAPO00287 AL138825.1-201ENST00000618587 192 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 SCARNA15.3-201ENST00000626315 122 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 SCARNA4.1-201ENST00000628597 123 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 U6.104-201ENST00000637979 90 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 AC132825.6-201ENST00000638861 357 ntBASIC4.24□□□□□ -1.73
RFXAPO00287 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFXAPO00287 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RFXAPO00287 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFXAPO00287 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.24□□□□□ -1.73
RFXAPO00287 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.23□□□□□ -1.73
RFXAPO00287 MAPK10-304ENST00000641341 3984 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFXAPO00287 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.23□□□□□ -1.73
RFXAPO00287 Y_RNA.269-201ENST00000364685 89 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 RNA5SP240-201ENST00000365355 128 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 RNU6-1329P-201ENST00000365664 107 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 RNU6-662P-201ENST00000384253 104 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 Y_RNA.471-201ENST00000384312 102 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 RNU1-44P-201ENST00000384453 163 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 MIR490-201ENST00000384865 128 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 MIR128-1-201ENST00000384921 82 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 MIR195-201ENST00000385194 87 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RFXAPO00287 AL603910.2-201ENST00000407268 136 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 U3.42-201ENST00000408746 214 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.23□□□□□ -1.73
RFXAPO00287 RPL30P3-201ENST00000424262 333 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 AL645568.3-201ENST00000433683 316 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.23□□□□□ -1.73
RFXAPO00287 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.23□□□□□ -1.73
RFXAPO00287 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.23□□□□□ -1.73
RFXAPO00287 RPS26P2-201ENST00000440331 348 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 RPEP5-201ENST00000441137 268 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 AC008481.1-201ENST00000463278 396 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 FTH1P24-201ENST00000503502 462 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.23□□□□□ -1.73
RFXAPO00287 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.23□□□□□ -1.73
RFXAPO00287 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.23□□□□□ -1.73
RFXAPO00287 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.23□□□□□ -1.73
RFXAPO00287 AL158827.2-201ENST00000602494 330 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 AL691447.3-201ENST00000635020 330 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 AL450472.1-202ENST00000637286 180 ntBASIC4.23□□□□□ -1.73
RFXAPO00287 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.23□□□□□ -1.73
RFXAPO00287 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFXAPO00287 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFXAPO00287 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RFXAPO00287 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RFXAPO00287 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFXAPO00287 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms