Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PDLIM1O00151 AC073114.1-201ENST00000612027 490 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.47□□□□□ -2.01
PDLIM1O00151 AC099654.13-201ENST00000639774 207 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.47□□□□□ -2.01
PDLIM1O00151 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PDLIM1O00151 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PDLIM1O00151 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
PDLIM1O00151 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
PDLIM1O00151 RNU6-960P-201ENST00000364056 120 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 SET-203ENST00000372688 801 ntTSL 2 BASIC2.46□□□□□ -2.02
PDLIM1O00151 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.46□□□□□ -2.02
PDLIM1O00151 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PDLIM1O00151 RPL23AP32-201ENST00000395315 459 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 AC127391.1-201ENST00000411737 98 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 HMGB3P2-201ENST00000411913 584 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 RPS3AP3-201ENST00000411933 242 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 HMGN1P14-201ENST00000412459 517 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 RPS12P24-201ENST00000412619 387 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
PDLIM1O00151 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.46□□□□□ -2.02
PDLIM1O00151 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 AL592045.1-201ENST00000429867 352 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 GTF2IP20-201ENST00000431663 360 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 HMGB3P12-201ENST00000438745 556 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 RPS24P13-201ENST00000442520 397 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 MTND6P13-201ENST00000443510 523 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 WASF1P1-201ENST00000447560 1131 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PDLIM1O00151 AL033528.1-201ENST00000453780 140 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.46□□□□□ -2.02
PDLIM1O00151 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.46□□□□□ -2.02
PDLIM1O00151 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.46□□□□□ -2.02
PDLIM1O00151 AC126182.1-201ENST00000478134 357 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 RPL39P36-201ENST00000490784 156 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.46□□□□□ -2.02
PDLIM1O00151 MRPS36P2-201ENST00000512569 299 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 RN7SKP132-201ENST00000516001 208 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 RNU1-103P-201ENST00000516502 125 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 RNU6-677P-201ENST00000516914 101 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.46□□□□□ -2.02
PDLIM1O00151 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.46□□□□□ -2.02
PDLIM1O00151 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.46□□□□□ -2.02
PDLIM1O00151 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.46□□□□□ -2.02
PDLIM1O00151 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.46□□□□□ -2.02
PDLIM1O00151 MIR3682-201ENST00000581338 84 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.46□□□□□ -2.02
PDLIM1O00151 CLIC4P2-201ENST00000601934 717 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 AL590229.1-201ENST00000603497 542 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 AL358072.1-201ENST00000604156 575 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 AC025811.1-201ENST00000604312 472 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 OR2AS2P-201ENST00000606902 342 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 MIR7106-201ENST00000612419 65 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 AL365204.3-201ENST00000612448 685 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 AL133173.2-201ENST00000614270 90 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 AC110994.2-201ENST00000635481 492 ntBASIC2.46□□□□□ -2.02
PDLIM1O00151 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.46□□□□□ -2.02
PDLIM1O00151 AC073343.1-201ENST00000328239 651 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 HSPE1P11-201ENST00000339579 310 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 RNU6-946P-201ENST00000383878 107 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 RNU6-817P-201ENST00000391083 104 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 AL122016.1-201ENST00000403365 367 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 ISCA1P1-201ENST00000426679 387 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.45□□□□□ -2.02
PDLIM1O00151 AC087499.2-201ENST00000432861 149 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 AC025750.2-201ENST00000442609 450 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 FABP5P13-201ENST00000452144 328 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 FABP5P15-201ENST00000453566 214 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 RNA5SP269-201ENST00000459032 137 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 RPL23AP45-201ENST00000476406 468 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 AC119751.5-201ENST00000514077 770 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 RNU2-46P-201ENST00000517038 113 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.45□□□□□ -2.02
PDLIM1O00151 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.45□□□□□ -2.02
PDLIM1O00151 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.45□□□□□ -2.02
PDLIM1O00151 CKS1BP7-201ENST00000522230 235 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.45□□□□□ -2.02
PDLIM1O00151 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.45□□□□□ -2.02
PDLIM1O00151 GLYCAM1-201ENST00000546596 285 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.45□□□□□ -2.02
PDLIM1O00151 NACAP3-201ENST00000552100 481 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 GTF3AP2-201ENST00000557014 266 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.45□□□□□ -2.02
PDLIM1O00151 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.45□□□□□ -2.02
PDLIM1O00151 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.45□□□□□ -2.02
PDLIM1O00151 AC005771.1-201ENST00000585581 349 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 OR1M4P-201ENST00000589199 287 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 AC013562.2-201ENST00000611632 603 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 DUSP12P1-201ENST00000612874 516 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 AL603839.4-201ENST00000624658 1005 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 MIR3974-201ENST00000637126 96 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PDLIM1O00151 AL137003.2-201ENST00000606924 2538 ntBASIC2.45□□□□□ -2.02
PDLIM1O00151 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.45□□□□□ -2.02
PDLIM1O00151 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PDLIM1O00151 ZNF720P1-201ENST00000562403 1939 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AL596028.1-201ENST00000326971 197 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 RNU4-1-201ENST00000363925 141 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 RNU6-7-201ENST00000364784 107 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms