Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RNU2-64P-201ENST00000411315 191 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AC009518.2-201ENST00000418056 731 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 NDUFA5P7-201ENST00000452914 242 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 BX322784.1-201ENST00000455793 1077 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 PRELID3BP1-201ENST00000457142 540 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 NRON-201ENST00000517270 370 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AC019176.1-201ENST00000518519 225 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 IGJP1-201ENST00000522682 475 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AL512310.1-201ENST00000548639 172 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 MIR3937-201ENST00000580135 106 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AC002545.1-201ENST00000592511 181 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AL451007.1-201ENST00000595491 289 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AL020997.3-201ENST00000602843 359 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AL391646.1-201ENST00000603860 190 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AC004805.2-201ENST00000605382 482 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AC123912.5-201ENST00000605470 343 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AC239868.4-201ENST00000608318 671 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 BX323046.1-201ENST00000610145 535 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AC106800.4-201ENST00000614905 153 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AC027335.2-201ENST00000624030 375 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AL159972.1-201ENST00000625150 448 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 AC119674.1-220ENST00000641502 1048 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 HAUS6P2-201ENST00000433254 2404 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-115P-201ENST00000364310 107 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 SNORA70.2-201ENST00000364506 135 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 MIR449B-201ENST00000384995 97 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 RPL22P22-201ENST00000395439 379 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-1140P-201ENST00000410517 106 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 RNU2-48P-201ENST00000410694 191 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 USP9YP33-201ENST00000412220 421 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 DPH3P2-201ENST00000422618 250 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 MTND5P15-201ENST00000434246 349 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AC002381.1-201ENST00000447049 280 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AL353691.1-201ENST00000451332 387 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 NUTF2P7-201ENST00000453086 375 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 RPL31P3-201ENST00000458430 332 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AC087477.1-201ENST00000465747 340 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 RN7SL542P-201ENST00000467147 294 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AC145146.1-201ENST00000496370 254 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 PTP4A1P4-201ENST00000512479 322 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 SNORA25.15-201ENST00000516487 89 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AC024224.1-201ENST00000538284 609 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AP000763.2-201ENST00000540641 163 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AL603758.1-201ENST00000618654 241 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 AL136313.1-201ENST00000624804 202 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 MIR4275-201ENST00000636486 87 ntBASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
LINC01558Q9Y6Z2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 SNORD33-201ENST00000362761 85 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 SNORA4.1-201ENST00000364263 144 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AC005345.1-201ENST00000431868 217 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 MOB1AP2-201ENST00000446060 614 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AL160314.1-201ENST00000490836 438 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 MTCO1P31-201ENST00000506355 492 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AC117522.2-201ENST00000510049 657 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AC008837.1-201ENST00000511513 412 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-322P-201ENST00000516010 103 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 RNA5SP290-201ENST00000517133 127 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-889P-201ENST00000517189 103 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-840P-201ENST00000517275 65 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AC104997.1-201ENST00000519761 717 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AC004817.2-201ENST00000561794 651 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 ATP5F1P7-201ENST00000567330 760 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AC136624.4-201ENST00000573044 370 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 MIR3160-1-201ENST00000577972 85 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 AC087045.1-201ENST00000605856 382 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 MIR8065-201ENST00000620577 100 ntBASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC0.42□□□□□ -2.34
LINC01558Q9Y6Z2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms