Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHB3Q9Y5E6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 RNY1P11-201ENST00000363759 113 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 RN7SKP224-201ENST00000364140 325 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 Y_RNA.572-201ENST00000384757 98 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 RNA5SP241-201ENST00000391326 114 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 U3.37-201ENST00000408528 213 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 RNU6-1245P-201ENST00000411130 106 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 AZGP1P2-201ENST00000454506 345 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 RN7SL329P-201ENST00000467740 299 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 RPL30P12-201ENST00000474666 353 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 RNU6-1256P-201ENST00000516539 103 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 IGLV3-24-201ENST00000517477 197 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 AP006245.2-201ENST00000522004 300 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 AL391813.1-201ENST00000603098 260 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 AC083809.1-201ENST00000615051 472 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 MIR6844-201ENST00000637122 62 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 AC073136.1-201ENST00000449426 2884 ntBASIC5.3□□□□□ -1.56
PCDHB3Q9Y5E6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 ZNF702P-202ENST00000434269 1966 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 SNORA25.7-201ENST00000364375 127 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 RNU6-643P-201ENST00000384018 107 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 SNORA26.5-201ENST00000391215 123 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 RNA5SP31-201ENST00000411144 127 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 ELOCP21-201ENST00000412558 336 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 DDX39BP1-205ENST00000422507 192 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 AC007919.1-201ENST00000429380 217 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 CKS1BP5-201ENST00000434172 273 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 MTCO1P44-201ENST00000441935 243 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 RN7SL447P-201ENST00000494711 245 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 AC098976.1-201ENST00000513014 541 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 NDUFA5P6-201ENST00000542110 379 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 AL773545.4-201ENST00000637262 310 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 AL513478.4-201ENST00000641636 310 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 GVINP1-202ENST00000531871 7271 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 AC134026.1-201ENST00000623249 2239 ntBASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB3Q9Y5E6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 AL359693.1-201ENST00000614959 2407 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 RNA5SP183-201ENST00000362452 119 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 RNU6-235P-201ENST00000362644 107 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 RNU5F-3P-201ENST00000363767 117 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 RNU6-915P-201ENST00000364943 103 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 RNU6-1310P-201ENST00000384153 107 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 RNU6-768P-201ENST00000384683 107 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 SNORA40.5-201ENST00000391061 128 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 AL009179.1-201ENST00000406085 265 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 AL772161.1-201ENST00000439130 476 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 PTMAP3-201ENST00000447474 330 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 AL121914.1-201ENST00000450188 156 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 AC006026.2-201ENST00000457376 180 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 AC231760.1-201ENST00000498002 260 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 RNA5SP54-201ENST00000516951 92 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms