Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 MIR4484-201ENST00000582855 83 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 AC233702.7-202ENST00000582941 211 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 AL353149.1-201ENST00000610667 244 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 U1.25-201ENST00000614085 162 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 RNA5SP350-201ENST00000363298 111 ntBASIC6.69□□□□□ -1.34
RNF39Q9H2S5 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 AC245096.1-201ENST00000413104 546 ntBASIC6.69□□□□□ -1.34
RNF39Q9H2S5 HMGN2P30-201ENST00000423237 256 ntBASIC6.69□□□□□ -1.34
RNF39Q9H2S5 AC022695.1-201ENST00000522089 237 ntBASIC6.69□□□□□ -1.34
RNF39Q9H2S5 AL513218.1-201ENST00000606527 391 ntBASIC6.69□□□□□ -1.34
RNF39Q9H2S5 AC091932.4-201ENST00000623386 200 ntBASIC6.69□□□□□ -1.34
RNF39Q9H2S5 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 INTS6P1-201ENST00000504674 2530 ntBASIC6.69□□□□□ -1.34
RNF39Q9H2S5 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF39Q9H2S5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 Y_RNA.247-201ENST00000364500 92 ntBASIC6.68□□□□□ -1.34
RNF39Q9H2S5 MIR433-201ENST00000384837 93 ntBASIC6.68□□□□□ -1.34
RNF39Q9H2S5 AC113412.1-201ENST00000425840 504 ntBASIC6.68□□□□□ -1.34
RNF39Q9H2S5 AC099677.2-201ENST00000436385 175 ntBASIC6.68□□□□□ -1.34
RNF39Q9H2S5 FTLP8-201ENST00000446770 267 ntBASIC6.68□□□□□ -1.34
RNF39Q9H2S5 AC145146.1-201ENST00000496370 254 ntBASIC6.68□□□□□ -1.34
RNF39Q9H2S5 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 RNA5SP438-201ENST00000516561 112 ntBASIC6.68□□□□□ -1.34
RNF39Q9H2S5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 MIR3189-201ENST00000578735 73 ntBASIC6.68□□□□□ -1.34
RNF39Q9H2S5 RNU4ATAC-201ENST00000580972 127 ntBASIC6.68□□□□□ -1.34
RNF39Q9H2S5 FKBP1AP1-201ENST00000594588 318 ntBASIC6.68□□□□□ -1.34
RNF39Q9H2S5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 AL359075.3-201ENST00000613288 217 ntBASIC6.68□□□□□ -1.34
RNF39Q9H2S5 AL136228.1-201ENST00000622221 319 ntBASIC6.68□□□□□ -1.34
RNF39Q9H2S5 AC006435.5-201ENST00000624486 112 ntBASIC6.68□□□□□ -1.34
RNF39Q9H2S5 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF39Q9H2S5 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 AL731556.1-201ENST00000394628 3711 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 AC007406.5-201ENST00000570140 3170 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 Y_RNA.140-201ENST00000363474 103 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 RNU6-1244P-201ENST00000363614 108 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 MIR3065-201ENST00000390137 79 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 Y_RNA.596-201ENST00000410462 109 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 RN7SKP200-201ENST00000410564 320 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 AL096829.1-201ENST00000413677 457 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 AC007568.1-201ENST00000422912 471 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 snoU13.11-201ENST00000459219 104 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 RPS23P2-201ENST00000463671 415 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 Y_RNA.667-201ENST00000516212 107 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms