Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AL672167.1-205ENST00000641112 3080 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-37P-201ENST00000362692 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-11P-201ENST00000364234 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-7-201ENST00000364784 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-8-201ENST00000365467 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-827P-201ENST00000365553 106 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-25P-201ENST00000383873 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-1-201ENST00000383898 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-36P-201ENST00000384172 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-4P-201ENST00000384205 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-5P-201ENST00000384238 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 SNORD63-201ENST00000384262 68 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-3P-201ENST00000384314 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-16P-201ENST00000384385 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-15P-201ENST00000384534 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-2-201ENST00000384627 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-29P-201ENST00000384637 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-9-201ENST00000384776 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 SNORD96B-201ENST00000386148 79 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 AL133270.1-201ENST00000402635 279 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU2-61P-201ENST00000411069 191 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 Z74021.1-201ENST00000423610 407 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 AL645608.4-201ENST00000423619 154 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 ELOCP18-201ENST00000434209 337 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 AC069285.2-201ENST00000440210 275 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 AC034236.1-201ENST00000469891 373 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 AC012158.1-204ENST00000483430 465 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 AC083982.1-201ENST00000485679 344 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 ANXA2P1-201ENST00000505539 926 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.679-201ENST00000516416 91 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-6P-201ENST00000606623 107 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RBBP8P1-201ENST00000449447 1844 ntBASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NUCKS1Q9H1E3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.275-201ENST00000364726 110 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-923P-201ENST00000364753 107 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.497-201ENST00000384447 98 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 SNORD20-201ENST00000384550 80 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 RNA5SP372-201ENST00000390836 115 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 SNORD56-201ENST00000413522 71 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 SSXP9-201ENST00000417503 292 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 RPS5P7-201ENST00000456664 608 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.638-201ENST00000459374 113 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 AC010469.1-201ENST00000463864 576 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 RN7SL41P-201ENST00000476144 297 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 RN7SL817P-201ENST00000480777 288 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 RPS15AP34-201ENST00000487776 387 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 IGLV2-34-201ENST00000490007 283 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 RN7SKP277-201ENST00000516895 283 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.706-201ENST00000516933 99 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 H3F3AP1-201ENST00000559984 334 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 RPL23AP78-201ENST00000599928 470 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 AP000787.2-201ENST00000604432 568 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 AC068254.2-201ENST00000623938 3577 ntBASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.1□□□□□ -1.59
NUCKS1Q9H1E3 Z73965.1-201ENST00000623412 2297 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.286-201ENST00000364813 102 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.441-201ENST00000384123 112 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 AL358453.1-201ENST00000422522 250 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 AL451062.2-201ENST00000427515 271 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 MTCO1P5-201ENST00000433573 344 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms