Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 ZNF962P-201ENST00000443465 3140 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 RN7SKP72-201ENST00000362327 292 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 RNA5SP389-201ENST00000362610 115 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 RNA5SP226-201ENST00000362653 115 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 RNA5SP161-201ENST00000363871 115 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 RNA5SP149-201ENST00000364952 92 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 MIR516A2-201ENST00000384888 90 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 MIR516A1-201ENST00000385033 90 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 HMGN2P21-201ENST00000447764 270 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 TREML3P-201ENST00000457327 501 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 RN7SL107P-201ENST00000478127 283 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 AL445187.1-201ENST00000502685 260 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 AC099522.1-202ENST00000514718 367 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 CARSP2-201ENST00000520688 277 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 IGHVIII-25-1-201ENST00000522143 241 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 AP004833.3-201ENST00000531893 322 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 RN7SL366P-201ENST00000577957 292 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 RN7SL708P-201ENST00000580952 299 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 Z97988.1-201ENST00000637697 135 ntBASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRTAP3-3Q9BYR6 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
KRTAP3-3Q9BYR6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
KRTAP3-3Q9BYR6 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.81
KRTAP3-3Q9BYR6 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 CEP170P1-201ENST00000502249 4587 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 RNU6-249P-201ENST00000363016 102 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 RNA5SP387-201ENST00000364226 106 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 SNORA10-201ENST00000384084 133 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 Y_RNA.537-201ENST00000384626 109 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 U3.31-201ENST00000408113 216 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 CST2P1-201ENST00000425770 87 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 BX276092.1-201ENST00000427368 251 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 AC093850.1-201ENST00000454121 251 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 RPL7AP30-201ENST00000482859 796 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 RN7SL272P-201ENST00000487762 289 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 AL390726.5-202ENST00000564800 256 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 AC007179.3-201ENST00000604976 235 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 AL356218.2-201ENST00000605264 187 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 FAM25E-202ENST00000608562 189 ntBASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 IARS-205ENST00000443024 4341 ntTSL 5 BASIC3.71□□□□□ -1.82
KRTAP3-3Q9BYR6 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms