Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 SNORD113-8-201ENST00000363497 74 ntBASIC5.18□□□□□ -1.58
RNF135Q8IUD6 RNU4-9P-201ENST00000364951 139 ntBASIC5.18□□□□□ -1.58
RNF135Q8IUD6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 AL035079.1-201ENST00000405210 287 ntBASIC5.18□□□□□ -1.58
RNF135Q8IUD6 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 AC098614.2-201ENST00000426040 255 ntBASIC5.18□□□□□ -1.58
RNF135Q8IUD6 AL590383.1-201ENST00000428602 75 ntBASIC5.18□□□□□ -1.58
RNF135Q8IUD6 snoU13.24-201ENST00000458998 104 ntBASIC5.18□□□□□ -1.58
RNF135Q8IUD6 AC023824.2-201ENST00000566185 400 ntBASIC5.18□□□□□ -1.58
RNF135Q8IUD6 AC120057.2-201ENST00000571520 271 ntBASIC5.18□□□□□ -1.58
RNF135Q8IUD6 MIR3144-201ENST00000579460 79 ntBASIC5.18□□□□□ -1.58
RNF135Q8IUD6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 AC053481.4-201ENST00000583164 216 ntBASIC5.18□□□□□ -1.58
RNF135Q8IUD6 AL078605.1-201ENST00000603529 500 ntBASIC5.18□□□□□ -1.58
RNF135Q8IUD6 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 SCARNA4-202ENST00000625402 129 ntBASIC5.18□□□□□ -1.58
RNF135Q8IUD6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF135Q8IUD6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 AL590240.1-201ENST00000334118 313 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 Y_RNA.8-201ENST00000362353 102 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 RNU6-937P-201ENST00000384325 106 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 AL358453.1-201ENST00000422522 250 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 snoU13.30-201ENST00000458951 104 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 RN7SL443P-201ENST00000464331 290 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 AC109327.1-201ENST00000471666 403 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 AL049830.2-201ENST00000480072 201 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 MRPL42P6-201ENST00000486397 371 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 AC106785.1-201ENST00000565935 262 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 MIR4659A-201ENST00000580269 81 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 BMS1P21-201ENST00000634565 365 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 AC007785.2-201ENST00000598627 1916 ntBASIC5.17□□□□□ -1.58
RNF135Q8IUD6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF135Q8IUD6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 RNU6-1301P-201ENST00000362724 104 ntBASIC5.16□□□□□ -1.58
RNF135Q8IUD6 SNORA2.3-201ENST00000383920 135 ntBASIC5.16□□□□□ -1.58
RNF135Q8IUD6 RNU6-72P-201ENST00000384285 79 ntBASIC5.16□□□□□ -1.58
RNF135Q8IUD6 AC017079.2-201ENST00000416102 485 ntBASIC5.16□□□□□ -1.58
RNF135Q8IUD6 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 Z82188.1-201ENST00000436709 154 ntBASIC5.16□□□□□ -1.58
RNF135Q8IUD6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 RPL7P47-201ENST00000497299 556 ntBASIC5.16□□□□□ -1.58
RNF135Q8IUD6 RNU6-496P-201ENST00000516145 99 ntBASIC5.16□□□□□ -1.58
RNF135Q8IUD6 RNU6-313P-201ENST00000516317 112 ntBASIC5.16□□□□□ -1.58
RNF135Q8IUD6 RNU6-62P-201ENST00000516526 102 ntBASIC5.16□□□□□ -1.58
RNF135Q8IUD6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 AC133555.2-201ENST00000550213 292 ntBASIC5.16□□□□□ -1.58
RNF135Q8IUD6 MIR3939-201ENST00000582614 106 ntBASIC5.16□□□□□ -1.58
RNF135Q8IUD6 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 AL590240.4-201ENST00000616908 390 ntBASIC5.16□□□□□ -1.58
RNF135Q8IUD6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms