Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 MIR335-201ENST00000362173 94 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 U3.15-201ENST00000365398 212 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 Y_RNA.462-201ENST00000384268 102 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 MIR548M-201ENST00000408260 86 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 RNU2-71P-201ENST00000411395 189 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 EIF4HP2-201ENST00000424380 563 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 AL590383.1-201ENST00000428602 75 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 U8.22-201ENST00000459141 133 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 SNORA70.16-201ENST00000516390 95 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 CASP1P1-201ENST00000526345 212 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 AC136624.4-201ENST00000573044 370 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 AC130289.1-201ENST00000577321 73 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 AP005019.3-201ENST00000620418 560 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 U4.7-201ENST00000638126 106 ntBASIC5.12□□□□□ -1.59
TRIM50Q86XT4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TRIM50Q86XT4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM50Q86XT4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM50Q86XT4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TRIM50Q86XT4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM50Q86XT4 Y_RNA.143-201ENST00000363520 106 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 Y_RNA.785-201ENST00000384290 109 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 SNORD115-46-201ENST00000390982 71 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 AL603910.2-201ENST00000407268 136 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 RNU2-14P-201ENST00000411053 191 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 CKS1BP6-201ENST00000424932 240 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM50Q86XT4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM50Q86XT4 ISCUP1-201ENST00000454451 448 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 TOMM22P6-201ENST00000465035 409 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 AC109327.1-201ENST00000471666 403 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 RNA5SP360-201ENST00000516555 118 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 AL137100.2-201ENST00000555786 315 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM50Q86XT4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM50Q86XT4 AL450472.1-202ENST00000637286 180 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 U6.99-201ENST00000637524 83 ntBASIC5.11□□□□□ -1.59
TRIM50Q86XT4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM50Q86XT4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM50Q86XT4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM50Q86XT4 LINC01109-201ENST00000603837 3081 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 RNU6-78P-201ENST00000362897 107 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 RNU6-280P-201ENST00000364145 104 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 Y_RNA.352-201ENST00000365439 102 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 RNA5SP36-201ENST00000410197 133 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 TMSB10P2-201ENST00000416049 131 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 TMEM167AP1-201ENST00000423409 219 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 AC098614.2-201ENST00000426040 255 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 RPS12P10-201ENST00000427031 377 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 RPL21P40-201ENST00000428586 483 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 RNA5SP249-201ENST00000516127 99 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 SNORA31.6-201ENST00000516241 130 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 SNORA31.8-201ENST00000516327 108 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 RN7SKP272-201ENST00000516988 232 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 SNORA31.18-201ENST00000517043 134 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 AP002770.2-201ENST00000543613 532 ntBASIC5.1□□□□□ -1.59
TRIM50Q86XT4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM50Q86XT4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM50Q86XT4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
TRIM50Q86XT4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM50Q86XT4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM50Q86XT4 AC022893.2-201ENST00000564832 3296 ntBASIC5.09□□□□□ -1.59
TRIM50Q86XT4 OR51H2P-202ENST00000641424 3046 ntBASIC5.09□□□□□ -1.59
TRIM50Q86XT4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
TRIM50Q86XT4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM50Q86XT4 Y_RNA.277-201ENST00000364754 102 ntBASIC5.09□□□□□ -1.59
TRIM50Q86XT4 RNY3P4-201ENST00000384428 101 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms