| APLP2 | Q06481 | TOPBP1-201 | ENST00000260810 | 5378 nt | APPRIS P1 TSL 1 (best) BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | MIR412-201 | ENST00000362142 | 91 nt | BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | Y_RNA.319-201 | ENST00000365138 | 92 nt | BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | RNU6-339P-201 | ENST00000384310 | 107 nt | BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | MIR626-201 | ENST00000385032 | 94 nt | BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | MIR888-201 | ENST00000401186 | 77 nt | BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | RNU6-554P-201 | ENST00000410466 | 106 nt | BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | AC099336.2-201 | ENST00000422457 | 254 nt | BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | RPL21P66-201 | ENST00000426566 | 466 nt | BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | AL080313.1-201 | ENST00000434947 | 405 nt | TSL 2 BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | RPS29P10-201 | ENST00000439197 | 166 nt | BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | AC099560.2-201 | ENST00000457554 | 255 nt | BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | AC012181.3-201 | ENST00000565861 | 601 nt | TSL 4 BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | UBL5-207 | ENST00000590068 | 390 nt | APPRIS P1 TSL 5 BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | AC211433.2-201 | ENST00000608433 | 387 nt | BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | AC004832.5-201 | ENST00000608677 | 401 nt | BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | ZBED6-202 | ENST00000550078 | 12481 nt | APPRIS P1 TSL 1 (best) BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | ZNF83-202 | ENST00000536937 | 2726 nt | APPRIS P1 TSL 2 BASIC | 8.22 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | LINC02475-202 | ENST00000512678 | 2622 nt | TSL 1 (best) BASIC | 8.21 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | A1CF-207 | ENST00000395495 | 9400 nt | TSL 5 BASIC | 8.21 | □□□□□ -1.09 | | |
| APLP2 | Q06481 | AHCTF1-201 | ENST00000326225 | 8633 nt | APPRIS P2 TSL 1 (best) BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | U3.3-201 | ENST00000362986 | 216 nt | BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | MIR301A-201 | ENST00000385261 | 86 nt | BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AL158156.1-201 | ENST00000422509 | 473 nt | BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AL442638.1-201 | ENST00000443359 | 237 nt | TSL 5 BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AL592431.1-201 | ENST00000451090 | 317 nt | TSL 3 BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AL353742.1-201 | ENST00000453455 | 224 nt | TSL 3 BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RNU6-561P-201 | ENST00000516222 | 102 nt | BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AC243829.4-201 | ENST00000620056 | 701 nt | TSL 5 BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | MIR6719-201 | ENST00000622428 | 87 nt | BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AC091932.3-201 | ENST00000624223 | 323 nt | BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | MIR4496-201 | ENST00000635896 | 61 nt | BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | CDC42BPA-201 | ENST00000334218 | 10134 nt | TSL 5 BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | ZNF678-201 | ENST00000343776 | 8556 nt | APPRIS P1 TSL 1 (best) BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | LINC02203-203 | ENST00000625989 | 1600 nt | TSL 1 (best) BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | ZNF704-201 | ENST00000327835 | 14386 nt | APPRIS P1 TSL 1 (best) BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | ALB-202 | ENST00000401494 | 1659 nt | TSL 5 BASIC | 8.21 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RNA5SP90-201 | ENST00000364801 | 99 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | SNORA8.3-201 | ENST00000384679 | 139 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AL512604.1-201 | ENST00000404812 | 257 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | U3.36-201 | ENST00000408418 | 213 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RNU6-1199P-201 | ENST00000411249 | 104 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RPL7AP49-201 | ENST00000429522 | 581 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AL158835.2-201 | ENST00000430970 | 300 nt | TSL 2 BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AL591438.1-201 | ENST00000433508 | 581 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AC010095.1-201 | ENST00000443543 | 144 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AL354824.2-201 | ENST00000458004 | 446 nt | TSL 3 BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | snoU109.4-201 | ENST00000458953 | 143 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RN7SL189P-201 | ENST00000468631 | 289 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | SNHG1-219 | ENST00000542112 | 780 nt | TSL 3 BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AC138360.1-201 | ENST00000552332 | 386 nt | TSL 3 BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | MIR3691-201 | ENST00000578066 | 90 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RPSAP73-201 | ENST00000614820 | 330 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AC083809.1-201 | ENST00000615051 | 472 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | MIR6864-201 | ENST00000617935 | 70 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AL050331.3-201 | ENST00000448740 | 2081 nt | TSL 2 BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | KTN1-214 | ENST00000554507 | 2057 nt | TSL 1 (best) BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AC010132.3-201 | ENST00000442788 | 2430 nt | APPRIS P5 TSL 5 BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AC093591.2-201 | ENST00000565254 | 3843 nt | BASIC | 8.2 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | GRIA2-202 | ENST00000296526 | 5621 nt | APPRIS P3 TSL 1 (best) BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RBBP6-203 | ENST00000381039 | 3384 nt | TSL 1 (best) BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | PTK2-206 | ENST00000517712 | 3351 nt | TSL 2 BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | ADAM5-202 | ENST00000399789 | 1942 nt | BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | TJP1-209 | ENST00000545208 | 5007 nt | APPRIS ALT2 TSL 5 BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | ATP1B4-202 | ENST00000361319 | 3856 nt | APPRIS P3 TSL 1 (best) BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | FAM111A-201 | ENST00000361723 | 3592 nt | APPRIS P1 TSL 2 BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | EMSY-215 | ENST00000533248 | 3798 nt | TSL 1 (best) BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | OR7A5-201 | ENST00000322301 | 4216 nt | APPRIS P1 BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RNA5SP507-201 | ENST00000363603 | 121 nt | BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | U8.4-201 | ENST00000363626 | 134 nt | BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | DEFB136-201 | ENST00000382209 | 237 nt | APPRIS P1 TSL 1 (best) BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | SNORD78.1-201 | ENST00000390866 | 65 nt | BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RNU6-1248P-201 | ENST00000391096 | 64 nt | BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | HSPE1P21-201 | ENST00000438283 | 308 nt | BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AL158147.1-201 | ENST00000443970 | 75 nt | BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AL136164.1-201 | ENST00000456795 | 352 nt | TSL 3 BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RPL21P6-201 | ENST00000479171 | 504 nt | BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | CREM-238 | ENST00000488741 | 651 nt | TSL 2 BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RN7SKP12-201 | ENST00000516275 | 143 nt | BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AC022154.1-203 | ENST00000594850 | 493 nt | TSL 3 BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AL590392.1-201 | ENST00000604960 | 446 nt | BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | DCLK1-204 | ENST00000379893 | 4612 nt | TSL 2 BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | LMO3-209 | ENST00000447609 | 3365 nt | APPRIS P1 TSL 1 (best) BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | ARHGAP5-206 | ENST00000539826 | 4881 nt | APPRIS P3 TSL 1 (best) BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | CCDC169-204 | ENST00000379864 | 5944 nt | TSL 1 (best) BASIC | 8.19 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | CDC42BPA-204 | ENST00000366767 | 9320 nt | TSL 1 (best) BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AC112198.2-201 | ENST00000426589 | 6996 nt | BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | BPY2-202 | ENST00000382585 | 321 nt | APPRIS P5 TSL 1 (best) BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | MT-TT-201 | ENST00000387460 | 66 nt | BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | TRAJ58-201 | ENST00000390481 | 63 nt | APPRIS P1 BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RAB9AP3-201 | ENST00000412737 | 573 nt | BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AC092811.1-201 | ENST00000428642 | 397 nt | TSL 3 BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RPL19P16-201 | ENST00000433839 | 588 nt | BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | AL049745.1-201 | ENST00000433953 | 286 nt | BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | EEF1A1P1-201 | ENST00000447052 | 739 nt | BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RAB9AP1-201 | ENST00000449393 | 573 nt | BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RPSAP50-201 | ENST00000481955 | 852 nt | BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | FTH1P24-201 | ENST00000503502 | 462 nt | BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | LINC02149-201 | ENST00000511443 | 558 nt | TSL 1 (best) BASIC | 8.18 | □□□□□ -1.1 | | |
| APLP2 | Q06481 | RNU4ATAC18P-201 | ENST00000516179 | 126 nt | BASIC | 8.18 | □□□□□ -1.1 | | |