Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 ELOCP14-201ENST00000428070 331 ntBASIC2.98□□□□□ -1.93
MSH3P20585 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH3P20585 SNRPEP4-201ENST00000435815 279 ntBASIC2.98□□□□□ -1.93
MSH3P20585 ELOCP7-201ENST00000439968 331 ntBASIC2.98□□□□□ -1.93
MSH3P20585 BNIP3P2-201ENST00000441221 577 ntBASIC2.98□□□□□ -1.93
MSH3P20585 RBMX2P4-201ENST00000441256 376 ntBASIC2.98□□□□□ -1.93
MSH3P20585 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH3P20585 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.98□□□□□ -1.93
MSH3P20585 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH3P20585 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.98□□□□□ -1.93
MSH3P20585 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.98□□□□□ -1.93
MSH3P20585 RNA5SP310-201ENST00000459084 116 ntBASIC2.98□□□□□ -1.93
MSH3P20585 MTCO3P38-201ENST00000468910 766 ntBASIC2.98□□□□□ -1.93
MSH3P20585 AC092989.1-201ENST00000481235 277 ntBASIC2.98□□□□□ -1.93
MSH3P20585 FAM92A1P2-202ENST00000504766 877 ntBASIC2.98□□□□□ -1.93
MSH3P20585 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH3P20585 SNORA31.3-201ENST00000516029 96 ntBASIC2.98□□□□□ -1.93
MSH3P20585 SNORA40.12-201ENST00000516329 111 ntBASIC2.98□□□□□ -1.93
MSH3P20585 RNU6-711P-201ENST00000517255 106 ntBASIC2.98□□□□□ -1.93
MSH3P20585 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
MSH3P20585 OR5B19P-201ENST00000531766 928 ntBASIC2.98□□□□□ -1.93
MSH3P20585 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
MSH3P20585 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH3P20585 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH3P20585 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH3P20585 SNORA59B-202ENST00000578183 701 ntBASIC2.98□□□□□ -1.93
MSH3P20585 MIR4325-201ENST00000583049 90 ntBASIC2.98□□□□□ -1.93
MSH3P20585 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.98□□□□□ -1.93
MSH3P20585 AC093788.1-201ENST00000609356 927 ntBASIC2.98□□□□□ -1.93
MSH3P20585 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
MSH3P20585 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH3P20585 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.98□□□□□ -1.93
MSH3P20585 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.98□□□□□ -1.93
MSH3P20585 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.98□□□□□ -1.93
MSH3P20585 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.98□□□□□ -1.93
MSH3P20585 AC090740.1-201ENST00000623193 2262 ntBASIC2.98□□□□□ -1.93
MSH3P20585 AC108206.1-201ENST00000570186 4159 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AC000403.1-201ENST00000613696 3585 ntBASIC2.97□□□□□ -1.93
MSH3P20585 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
MSH3P20585 OR4G2P-202ENST00000641004 1759 ntBASIC2.97□□□□□ -1.93
MSH3P20585 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.97□□□□□ -1.93
MSH3P20585 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
MSH3P20585 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
MSH3P20585 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH3P20585 Y_RNA.453-201ENST00000384223 109 ntBASIC2.97□□□□□ -1.93
MSH3P20585 SNORA54-201ENST00000384281 123 ntBASIC2.97□□□□□ -1.93
MSH3P20585 SNORA24.1-201ENST00000384401 135 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AL513331.1-201ENST00000411908 397 ntBASIC2.97□□□□□ -1.93
MSH3P20585 USP9YP27-201ENST00000418455 438 ntBASIC2.97□□□□□ -1.93
MSH3P20585 RPL27AP8-201ENST00000424277 446 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AC093151.1-201ENST00000427711 313 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AL596276.1-201ENST00000434465 418 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH3P20585 AC006512.1-201ENST00000468816 291 ntBASIC2.97□□□□□ -1.93
MSH3P20585 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
MSH3P20585 MTAPP1-201ENST00000489154 819 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH3P20585 RNU6-1281P-201ENST00000516223 105 ntBASIC2.97□□□□□ -1.93
MSH3P20585 SCARNA15.2-201ENST00000516409 127 ntBASIC2.97□□□□□ -1.93
MSH3P20585 RNU6-1178P-201ENST00000516674 107 ntBASIC2.97□□□□□ -1.93
MSH3P20585 RNU6-835P-201ENST00000516974 104 ntBASIC2.97□□□□□ -1.93
MSH3P20585 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.97□□□□□ -1.93
MSH3P20585 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.97□□□□□ -1.93
MSH3P20585 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.97□□□□□ -1.93
MSH3P20585 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.97□□□□□ -1.93
MSH3P20585 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.97□□□□□ -1.93
MSH3P20585 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH3P20585 AC034105.3-201ENST00000565294 442 ntBASIC2.97□□□□□ -1.93
MSH3P20585 MTCO3P24-201ENST00000572729 782 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AC008752.3-201ENST00000588113 712 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.97□□□□□ -1.93
MSH3P20585 AC078899.3-201ENST00000599065 212 ntBASIC2.97□□□□□ -1.93
MSH3P20585 DPPA3P3-201ENST00000603842 430 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AC007619.2-201ENST00000605743 379 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AL365204.3-201ENST00000612448 685 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AP001486.3-201ENST00000615334 372 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AC090132.2-201ENST00000615881 347 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AC002076.2-201ENST00000617362 122 ntBASIC2.97□□□□□ -1.93
MSH3P20585 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.97□□□□□ -1.93
MSH3P20585 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
MSH3P20585 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
MSH3P20585 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.97□□□□□ -1.93
MSH3P20585 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
MSH3P20585 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
MSH3P20585 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
MSH3P20585 AC073325.2-201ENST00000339545 159 ntBASIC2.96□□□□□ -1.94
MSH3P20585 RNU6-179P-201ENST00000363350 107 ntBASIC2.96□□□□□ -1.94
MSH3P20585 RNU6-1283P-201ENST00000365314 105 ntBASIC2.96□□□□□ -1.94
MSH3P20585 RNU6-61P-201ENST00000365528 109 ntBASIC2.96□□□□□ -1.94
MSH3P20585 SNORA9-201ENST00000384215 133 ntBASIC2.96□□□□□ -1.94
MSH3P20585 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.96□□□□□ -1.94
MSH3P20585 AL591416.1-201ENST00000404015 867 ntBASIC2.96□□□□□ -1.94
MSH3P20585 AL139397.2-201ENST00000404529 772 ntBASIC2.96□□□□□ -1.94
MSH3P20585 MIR1290-201ENST00000408735 78 ntBASIC2.96□□□□□ -1.94
MSH3P20585 RNU6-908P-201ENST00000410160 94 ntBASIC2.96□□□□□ -1.94
MSH3P20585 RNU6-1077P-201ENST00000410506 102 ntBASIC2.96□□□□□ -1.94
MSH3P20585 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.96□□□□□ -1.94
MSH3P20585 RPL23AP83-201ENST00000434984 473 ntBASIC2.96□□□□□ -1.94
MSH3P20585 AC016691.1-201ENST00000441321 413 ntBASIC2.96□□□□□ -1.94
MSH3P20585 NEFMP1-201ENST00000443423 1006 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms