Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AP004607.1-201ENST00000524456 203 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA2O43364 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXA2O43364 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA2O43364 AL590392.1-201ENST00000604960 446 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 AP002826.1-201ENST00000608835 315 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 AC084757.4-201ENST00000616350 526 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 AC006065.5-201ENST00000623427 349 ntBASIC5.44□□□□□ -1.54
HOXA2O43364 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HOXA2O43364 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA2O43364 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA2O43364 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA2O43364 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA2O43364 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA2O43364 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA2O43364 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXA2O43364 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA2O43364 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA2O43364 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA2O43364 RNU4-56P-201ENST00000364700 142 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 SNORA70.6-201ENST00000383934 134 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 RNU6-281P-201ENST00000384212 103 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 AC073264.2-201ENST00000448886 166 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 RNU5F-8P-201ENST00000515941 111 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 AC136777.2-201ENST00000522979 358 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 AC016256.1-201ENST00000547971 354 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 AL391261.3-201ENST00000557194 520 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 AC024153.1-201ENST00000603103 365 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 AL138963.2-201ENST00000605137 226 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 AC010632.3-201ENST00000611377 369 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 MIR7641-1-201ENST00000627518 61 ntBASIC5.43□□□□□ -1.54
HOXA2O43364 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HOXA2O43364 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA2O43364 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HOXA2O43364 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA2O43364 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA2O43364 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA2O43364 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA2O43364 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HOXA2O43364 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HOXA2O43364 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA2O43364 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXA2O43364 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA2O43364 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA2O43364 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA2O43364 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
HOXA2O43364 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 AC079741.1-201ENST00000321498 212 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 SNORA29-201ENST00000384183 140 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 Y_RNA.571-201ENST00000384753 98 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA2O43364 SNORA77-201ENST00000408716 125 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.42□□□□□ -1.54
HOXA2O43364 BX323845.1-201ENST00000432417 179 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXA2O43364 AC099670.2-201ENST00000435130 321 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA2O43364 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXA2O43364 RPS29P9-201ENST00000440360 171 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXA2O43364 RN7SL481P-201ENST00000477764 299 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 AC008897.1-201ENST00000494006 347 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXA2O43364 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXA2O43364 MED28P6-201ENST00000558776 231 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXA2O43364 AC053481.4-201ENST00000583164 216 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 RPL7P50-201ENST00000600588 727 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 AL365222.1-201ENST00000614661 98 ntBASIC5.42□□□□□ -1.54
HOXA2O43364 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXA2O43364 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA2O43364 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HOXA2O43364 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA2O43364 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HOXA2O43364 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA2O43364 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXA2O43364 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA2O43364 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA2O43364 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA2O43364 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA2O43364 ZNF204P-201ENST00000416749 2397 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA2O43364 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA2O43364 RNA5SP197-201ENST00000363357 119 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 RNU6-1145P-201ENST00000384246 107 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 MIR124-3-201ENST00000384866 87 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 MIR329-1-201ENST00000385028 80 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 Y_RNA.586-201ENST00000391146 98 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 MIR298-201ENST00000401212 88 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 HLFP1-201ENST00000402375 499 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 MTHFD2P2-201ENST00000407725 247 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 RN7SKP100-201ENST00000411258 284 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXA2O43364 COX6CP13-201ENST00000428703 226 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 AC005154.2-201ENST00000438110 379 ntBASIC5.41□□□□□ -1.54
HOXA2O43364 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXA2O43364 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXA2O43364 AC005042.3-201ENST00000453230 174 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms