Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SNORD78.2-201ENST00000391076 69 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 MRPL35P1-201ENST00000404272 572 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 AL603910.2-201ENST00000407268 136 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 RPEP3-201ENST00000425462 676 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 SNRPEP9-201ENST00000436794 238 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 RPS29P9-201ENST00000440360 171 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.02□□□□□ -1.61
SIX5Q8N196 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.02□□□□□ -1.61
SIX5Q8N196 NIP7P2-201ENST00000485801 544 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 AL132838.2-201ENST00000492041 314 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 RNU6-1338P-201ENST00000516328 91 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 RNU6-1073P-201ENST00000517182 106 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 AC010201.1-201ENST00000605051 540 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 BX284668.6-201ENST00000606899 438 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 MIR92B-201ENST00000607575 96 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 AC011944.2-201ENST00000624440 683 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SIX5Q8N196 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX5Q8N196 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
SIX5Q8N196 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SIX5Q8N196 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX5Q8N196 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX5Q8N196 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SIX5Q8N196 AC126323.6-202ENST00000568092 3511 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX5Q8N196 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX5Q8N196 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX5Q8N196 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX5Q8N196 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX5Q8N196 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX5Q8N196 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX5Q8N196 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX5Q8N196 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX5Q8N196 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX5Q8N196 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX5Q8N196 Y_RNA.462-201ENST00000384268 102 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SIX5Q8N196 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SIX5Q8N196 AC114755.2-201ENST00000413520 361 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 RPS5P7-201ENST00000456664 608 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 RPL31P13-201ENST00000484151 370 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 RPL21P129-201ENST00000491732 478 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 AC022080.3-201ENST00000544433 482 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX5Q8N196 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX5Q8N196 AC007224.1-201ENST00000564410 144 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX5Q8N196 AC090617.3-201ENST00000573670 475 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 AC136932.1-201ENST00000574771 208 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 AC130289.1-201ENST00000577321 73 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 MIR3939-201ENST00000582614 106 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 AC060766.3-201ENST00000591442 263 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX5Q8N196 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX5Q8N196 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX5Q8N196 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX5Q8N196 CR381572.2-201ENST00000624852 397 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.01□□□□□ -1.61
SIX5Q8N196 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX5Q8N196 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SIX5Q8N196 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SIX5Q8N196 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SIX5Q8N196 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SIX5Q8N196 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX5Q8N196 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX5Q8N196 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX5Q8N196 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SIX5Q8N196 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SIX5Q8N196 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SIX5Q8N196 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5□□□□□ -1.61
SIX5Q8N196 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5□□□□□ -1.61
SIX5Q8N196 Y_RNA.270-201ENST00000364693 104 ntBASIC5□□□□□ -1.61
SIX5Q8N196 Y_RNA.297-201ENST00000364950 91 ntBASIC5□□□□□ -1.61
SIX5Q8N196 UBBP2-201ENST00000376781 231 ntBASIC5□□□□□ -1.61
SIX5Q8N196 SNORA37-201ENST00000384504 129 ntBASIC5□□□□□ -1.61
SIX5Q8N196 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5□□□□□ -1.61
SIX5Q8N196 snoU13.30-201ENST00000458951 104 ntBASIC5□□□□□ -1.61
SIX5Q8N196 MED28P2-201ENST00000475771 317 ntBASIC5□□□□□ -1.61
SIX5Q8N196 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5□□□□□ -1.61
SIX5Q8N196 RN7SL814P-201ENST00000487715 300 ntBASIC5□□□□□ -1.61
SIX5Q8N196 RPS23P5-201ENST00000495419 428 ntBASIC5□□□□□ -1.61
SIX5Q8N196 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5□□□□□ -1.61
SIX5Q8N196 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5□□□□□ -1.61
SIX5Q8N196 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5□□□□□ -1.61
SIX5Q8N196 AC107016.1-201ENST00000550463 337 ntBASIC5□□□□□ -1.61
SIX5Q8N196 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5□□□□□ -1.61
SIX5Q8N196 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5□□□□□ -1.61
SIX5Q8N196 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5□□□□□ -1.61
SIX5Q8N196 AC136601.2-201ENST00000604356 474 ntBASIC5□□□□□ -1.61
SIX5Q8N196 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5□□□□□ -1.61
SIX5Q8N196 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5□□□□□ -1.61
SIX5Q8N196 AL450472.1-202ENST00000637286 180 ntBASIC5□□□□□ -1.61
SIX5Q8N196 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5□□□□□ -1.61
SIX5Q8N196 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SIX5Q8N196 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SIX5Q8N196 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SIX5Q8N196 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5□□□□□ -1.61
SIX5Q8N196 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms