Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 RNU6-805P-201ENST00000365643 106 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 SNORA16.2-201ENST00000390991 127 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 RNU6-1025P-201ENST00000410629 104 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 DBIP2-201ENST00000419076 262 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 RPL30P16-201ENST00000419341 429 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 AC099548.1-201ENST00000421443 426 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 HMGB1P31-201ENST00000437242 427 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 SETP5-201ENST00000437270 562 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 AC008264.1-201ENST00000447612 367 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 HMGN1P18-201ENST00000457642 277 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 TRBV1-201ENST00000476502 284 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 RNU6-1178P-201ENST00000516674 107 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 SNORA70.18-201ENST00000516696 98 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 AC023632.4-201ENST00000517783 191 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 AC107934.2-201ENST00000518653 310 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 AP000867.2-201ENST00000532468 320 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 MIR5685-201ENST00000579080 79 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 U4.6-201ENST00000621618 127 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 PLCE1P1-201ENST00000622094 305 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 U2.21-201ENST00000637295 81 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 AC032011.1-201ENST00000611703 1549 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 Y_RNA.33-201ENST00000362591 102 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 Y_RNA.231-201ENST00000364358 102 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 RNA5SP51-201ENST00000364750 119 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 SNORA73.2-201ENST00000364946 201 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 RNU4-66P-201ENST00000365199 138 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 RNU6-395P-201ENST00000365662 106 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 AL592114.1-201ENST00000403842 483 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 AL356968.1-201ENST00000416622 474 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 SKA2P1-201ENST00000425592 390 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 SRIP2-201ENST00000428470 166 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 AC010099.1-201ENST00000455434 375 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 RPL23AP67-201ENST00000465341 474 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 MTCYBP18-201ENST00000501056 747 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 AC112206.3-201ENST00000514578 389 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 AC104027.1-201ENST00000521887 300 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 MTND4P7-201ENST00000523876 130 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 BNIP3P6-201ENST00000549284 499 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 H3F3AP1-201ENST00000559984 334 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 MIR4474-201ENST00000579189 78 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 AC060780.3-201ENST00000589464 80 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 AC073539.2-201ENST00000597113 165 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 AP003400.5-201ENST00000624827 617 ntBASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.26□□□□□ -1.89
RUNDC3AQ59EK9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 SNORD3E-201ENST00000362899 217 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 Y_RNA.390-201ENST00000383932 102 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 U8.11-201ENST00000384699 133 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 U8.12-201ENST00000384701 133 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 SNORD70.1-201ENST00000391007 85 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 RNA5SP252-201ENST00000391131 119 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 RN7SKP202-201ENST00000410439 330 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 RPL21P90-201ENST00000415692 466 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms