Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MTCO3P40-201ENST00000392516 676 ntBASIC2.6□□□□□ -1.99
PHF1O43189 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.6□□□□□ -1.99
PHF1O43189 U3.42-201ENST00000408746 214 ntBASIC2.6□□□□□ -1.99
PHF1O43189 RNU4-55P-201ENST00000410731 137 ntBASIC2.6□□□□□ -1.99
PHF1O43189 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.6□□□□□ -1.99
PHF1O43189 RPL21P24-201ENST00000413752 448 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.6□□□□□ -1.99
PHF1O43189 UBE2FP1-201ENST00000416536 447 ntBASIC2.6□□□□□ -1.99
PHF1O43189 ISCA1P1-201ENST00000426679 387 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.6□□□□□ -1.99
PHF1O43189 AC073464.1-201ENST00000429823 534 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AL451074.3-201ENST00000437709 472 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.6□□□□□ -1.99
PHF1O43189 RPS12P18-201ENST00000442381 270 ntBASIC2.6□□□□□ -1.99
PHF1O43189 FGF7P6-202ENST00000451282 293 ntBASIC2.6□□□□□ -1.99
PHF1O43189 RNA5SP310-201ENST00000459084 116 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
PHF1O43189 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.6□□□□□ -1.99
PHF1O43189 RN7SKP43-201ENST00000516173 320 ntBASIC2.6□□□□□ -1.99
PHF1O43189 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.6□□□□□ -1.99
PHF1O43189 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.6□□□□□ -1.99
PHF1O43189 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PHF1O43189 SNRPGP16-201ENST00000533275 226 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AC123904.3-201ENST00000547218 814 ntBASIC2.6□□□□□ -1.99
PHF1O43189 ARL2BPP2-201ENST00000550907 489 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.6□□□□□ -1.99
PHF1O43189 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.6□□□□□ -1.99
PHF1O43189 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.6□□□□□ -1.99
PHF1O43189 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.6□□□□□ -1.99
PHF1O43189 ELOCP29-201ENST00000588193 334 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AP001330.4-201ENST00000604350 154 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AL136363.1-201ENST00000605349 337 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AP002360.4-201ENST00000606980 481 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AF250324.2-201ENST00000608299 610 ntBASIC2.6□□□□□ -1.99
PHF1O43189 MIR6076-201ENST00000617521 113 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AL158209.2-201ENST00000619266 216 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AC090617.7-201ENST00000623952 126 ntBASIC2.6□□□□□ -1.99
PHF1O43189 CR381653.2-201ENST00000624041 768 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AC009161.2-201ENST00000624626 138 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AC005609.4-201ENST00000625071 447 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AL157786.1-207ENST00000627771 695 ntBASIC2.6□□□□□ -1.99
PHF1O43189 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.6□□□□□ -1.99
PHF1O43189 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PHF1O43189 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
PHF1O43189 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PHF1O43189 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.59□□□□□ -1.99
PHF1O43189 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PHF1O43189 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.59□□□□□ -1.99
PHF1O43189 Y_RNA.1-201ENST00000352915 104 ntBASIC2.59□□□□□ -1.99
PHF1O43189 SNORD56.2-201ENST00000363242 71 ntBASIC2.59□□□□□ -1.99
PHF1O43189 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PHF1O43189 SNORA7.4-201ENST00000384249 137 ntBASIC2.59□□□□□ -1.99
PHF1O43189 SNORD15B-201ENST00000384714 146 ntBASIC2.59□□□□□ -1.99
PHF1O43189 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PHF1O43189 SNORD67-201ENST00000390833 111 ntBASIC2.59□□□□□ -1.99
PHF1O43189 RNU6-278P-201ENST00000390945 109 ntBASIC2.59□□□□□ -1.99
PHF1O43189 CALM2P3-201ENST00000400429 449 ntBASIC2.59□□□□□ -1.99
PHF1O43189 RPS4XP8-201ENST00000402039 771 ntBASIC2.59□□□□□ -1.99
PHF1O43189 CIR1P3-201ENST00000405137 479 ntBASIC2.59□□□□□ -1.99
PHF1O43189 RNU2-36P-201ENST00000410361 191 ntBASIC2.59□□□□□ -1.99
PHF1O43189 RNA5SP274-201ENST00000410484 108 ntBASIC2.59□□□□□ -1.99
PHF1O43189 RNA5SP344-201ENST00000411081 104 ntBASIC2.59□□□□□ -1.99
PHF1O43189 EEF1A1P41-201ENST00000414667 207 ntBASIC2.59□□□□□ -1.99
PHF1O43189 EIF1P1-201ENST00000421436 341 ntBASIC2.59□□□□□ -1.99
PHF1O43189 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.59□□□□□ -1.99
PHF1O43189 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PHF1O43189 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.59□□□□□ -1.99
PHF1O43189 USP9YP18-201ENST00000425912 695 ntBASIC2.59□□□□□ -1.99
PHF1O43189 MED13P1-201ENST00000428342 171 ntBASIC2.59□□□□□ -1.99
PHF1O43189 GPR143P-201ENST00000434155 205 ntBASIC2.59□□□□□ -1.99
PHF1O43189 HMGB3P12-201ENST00000438745 556 ntBASIC2.59□□□□□ -1.99
PHF1O43189 EEF1B2P7-201ENST00000451177 676 ntBASIC2.59□□□□□ -1.99
PHF1O43189 ELOCP23-201ENST00000452014 332 ntBASIC2.59□□□□□ -1.99
PHF1O43189 AC013267.1-201ENST00000458227 267 ntBASIC2.59□□□□□ -1.99
PHF1O43189 AL049714.1-201ENST00000466686 347 ntBASIC2.59□□□□□ -1.99
PHF1O43189 AC010631.1-201ENST00000474150 156 ntBASIC2.59□□□□□ -1.99
PHF1O43189 UBL5P3-201ENST00000475112 231 ntBASIC2.59□□□□□ -1.99
PHF1O43189 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.59□□□□□ -1.99
PHF1O43189 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.59□□□□□ -1.99
PHF1O43189 AC007182.2-201ENST00000489251 402 ntBASIC2.59□□□□□ -1.99
PHF1O43189 RNU2-10P-201ENST00000516375 211 ntBASIC2.59□□□□□ -1.99
PHF1O43189 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.59□□□□□ -1.99
PHF1O43189 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.59□□□□□ -1.99
PHF1O43189 AC128657.1-201ENST00000549459 145 ntBASIC2.59□□□□□ -1.99
PHF1O43189 RPS3AP4-201ENST00000555161 764 ntBASIC2.59□□□□□ -1.99
PHF1O43189 AL359212.1-201ENST00000556608 614 ntBASIC2.59□□□□□ -1.99
PHF1O43189 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.59□□□□□ -1.99
PHF1O43189 MED28P6-201ENST00000558776 231 ntBASIC2.59□□□□□ -1.99
PHF1O43189 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.59□□□□□ -1.99
PHF1O43189 AP001094.1-201ENST00000579805 193 ntBASIC2.59□□□□□ -1.99
PHF1O43189 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.59□□□□□ -1.99
PHF1O43189 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.59□□□□□ -1.99
PHF1O43189 AP001330.5-201ENST00000607176 411 ntBASIC2.59□□□□□ -1.99
PHF1O43189 AL161734.1-201ENST00000609720 557 ntBASIC2.59□□□□□ -1.99
PHF1O43189 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.59□□□□□ -1.99
PHF1O43189 MIR6863-201ENST00000636112 90 ntBASIC2.59□□□□□ -1.99
PHF1O43189 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
PHF1O43189 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.59□□□□□ -1.99
PHF1O43189 AC027514.1-201ENST00000588561 1603 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms