Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.45□□□□□ -1.7
SSU72Q9NP77 MTCO3P29-201ENST00000432119 779 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.45□□□□□ -1.7
SSU72Q9NP77 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.45□□□□□ -1.7
SSU72Q9NP77 AL451050.1-201ENST00000450126 415 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 AC012671.1-201ENST00000451912 203 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.45□□□□□ -1.7
SSU72Q9NP77 RN7SL30P-201ENST00000488416 306 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.45□□□□□ -1.7
SSU72Q9NP77 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.45□□□□□ -1.7
SSU72Q9NP77 RN7SKP147-201ENST00000517154 244 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 IGKV2-23-201ENST00000518729 323 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 AC004792.1-201ENST00000614523 137 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.45□□□□□ -1.7
SSU72Q9NP77 AL450472.1-202ENST00000637286 180 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 AL049767.1-202ENST00000637826 242 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSU72Q9NP77 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SSU72Q9NP77 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SSU72Q9NP77 ZNF137P-201ENST00000456718 1920 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSU72Q9NP77 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSU72Q9NP77 MAPK10-253ENST00000641010 4072 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.44□□□□□ -1.7
SSU72Q9NP77 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSU72Q9NP77 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SSU72Q9NP77 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSU72Q9NP77 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSU72Q9NP77 AL391987.6-201ENST00000305671 199 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 RPL23P2-201ENST00000320371 421 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 MIR412-201ENST00000362142 91 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 RNA5SP388-201ENST00000362584 119 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 RNU6-356P-201ENST00000384140 107 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 RNU1-106P-201ENST00000384382 164 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 MIR323B-201ENST00000385269 82 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SSU72Q9NP77 MIR1282-201ENST00000408865 101 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 Z85995.1-201ENST00000415547 335 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.44□□□□□ -1.7
SSU72Q9NP77 AC013470.1-201ENST00000453438 462 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
SSU72Q9NP77 RN7SKP66-201ENST00000516681 231 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.44□□□□□ -1.7
SSU72Q9NP77 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.44□□□□□ -1.7
SSU72Q9NP77 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.44□□□□□ -1.7
SSU72Q9NP77 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSU72Q9NP77 AC099669.2-201ENST00000616549 437 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.44□□□□□ -1.7
SSU72Q9NP77 AC008785.1-201ENST00000624475 456 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.44□□□□□ -1.7
SSU72Q9NP77 AL139811.1-201ENST00000424779 2299 ntBASIC4.44□□□□□ -1.7
SSU72Q9NP77 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSU72Q9NP77 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSU72Q9NP77 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSU72Q9NP77 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.43□□□□□ -1.7
SSU72Q9NP77 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
SSU72Q9NP77 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
SSU72Q9NP77 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SSU72Q9NP77 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SSU72Q9NP77 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSU72Q9NP77 SNORA68.2-201ENST00000391263 128 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 PCNPP3-201ENST00000393579 471 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 AL022722.2-201ENST00000402519 180 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 SNORA11.3-201ENST00000408471 128 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 MIR1911-201ENST00000410783 80 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 AL139156.1-201ENST00000412785 841 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.43□□□□□ -1.7
SSU72Q9NP77 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSU72Q9NP77 C4BPAP2-201ENST00000428434 478 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 AL392103.1-201ENST00000447000 198 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 PTMAP3-201ENST00000447474 330 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 AC009963.2-201ENST00000453431 138 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 RN7SL585P-201ENST00000470538 280 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 RPS26P15-201ENST00000488067 348 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 RNU6-789P-201ENST00000517105 102 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.43□□□□□ -1.7
SSU72Q9NP77 DEFB108E-201ENST00000524692 240 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.43□□□□□ -1.7
SSU72Q9NP77 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.43□□□□□ -1.7
SSU72Q9NP77 SNORA11.6-201ENST00000619030 128 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 AC091905.4-201ENST00000623432 202 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 AC090617.7-201ENST00000623952 126 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 U6.92-201ENST00000636464 89 ntBASIC4.43□□□□□ -1.7
SSU72Q9NP77 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SSU72Q9NP77 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSU72Q9NP77 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSU72Q9NP77 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSU72Q9NP77 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSU72Q9NP77 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSU72Q9NP77 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SSU72Q9NP77 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSU72Q9NP77 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SSU72Q9NP77 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSU72Q9NP77 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.42□□□□□ -1.7
SSU72Q9NP77 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SSU72Q9NP77 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSU72Q9NP77 Y_RNA.16-201ENST00000362421 102 ntBASIC4.42□□□□□ -1.7
SSU72Q9NP77 Y_RNA.29-201ENST00000362570 113 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms