Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 AC126124.2-201ENST00000413542 321 ntBASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 AL359073.1-201ENST00000448036 403 ntBASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAF1Q9H7N4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 RNU6-787P-201ENST00000384032 107 ntBASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 RNU6-242P-201ENST00000384359 107 ntBASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 CBX3P9-201ENST00000402326 552 ntBASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 MIR1278-201ENST00000408753 81 ntBASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 RN7SKP151-201ENST00000410230 316 ntBASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 RNA5SP31-201ENST00000411144 127 ntBASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 RN7SL172P-201ENST00000460535 303 ntBASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 AC090515.1-201ENST00000465295 476 ntBASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 RN7SL547P-201ENST00000490793 290 ntBASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 RNU6-857P-201ENST00000515893 110 ntBASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 IGLL4P-201ENST00000614590 133 ntBASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 uc_338.18-201ENST00000615451 175 ntBASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 AC144833.1-201ENST00000567953 4089 ntBASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
SCAF1Q9H7N4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 RNU6-799P-201ENST00000363567 107 ntBASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 CALM2P4-201ENST00000430810 426 ntBASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 AC006466.1-201ENST00000438721 289 ntBASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 AC006026.2-201ENST00000457376 180 ntBASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 AC010618.1-201ENST00000469924 477 ntBASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 AC021231.3-201ENST00000558497 370 ntBASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC8.6□□□□□ -1.03
SCAF1Q9H7N4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 Y_RNA.415-201ENST00000384012 112 ntBASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 MIR514A1-201ENST00000385133 98 ntBASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 AC117454.1-201ENST00000491120 168 ntBASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 MIR4660-201ENST00000583549 74 ntBASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 AC138965.3-201ENST00000623875 498 ntBASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 AL133383.2-201ENST00000622958 2336 ntBASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 AP002512.4-202ENST00000641599 4530 ntBASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 ABCC13-202ENST00000463099 3842 ntBASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCAF1Q9H7N4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 SNORA48.5-201ENST00000391143 135 ntBASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 AL078599.1-201ENST00000402075 293 ntBASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 AC119751.6-201ENST00000416712 186 ntBASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 AC098614.2-201ENST00000426040 255 ntBASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 AL451050.1-201ENST00000450126 415 ntBASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 AC006517.1-201ENST00000480485 328 ntBASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 SNORA43.3-201ENST00000517240 103 ntBASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 U6.99-201ENST00000637524 83 ntBASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SCAF1Q9H7N4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms