Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 RNU6-718P-201ENST00000516166 105 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 RN7SKP43-201ENST00000516173 320 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 SNORD27.1-201ENST00000516319 72 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AP006587.4-201ENST00000526053 529 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AC022690.1-201ENST00000526681 550 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 HSPE1P20-201ENST00000538133 289 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AK6P1-201ENST00000540219 478 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AC011611.1-201ENST00000552179 197 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AP005205.1-201ENST00000563503 508 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 HMGB1P6-201ENST00000569046 646 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AC002545.1-201ENST00000592511 181 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AC007363.1-201ENST00000604736 620 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 uc_338.25-201ENST00000613756 156 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AC090517.2-201ENST00000614966 680 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AC093648.1-201ENST00000623546 606 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AC005609.4-201ENST00000625071 447 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 AL049781.1-201ENST00000623195 3585 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 ZNF807-201ENST00000328088 1707 ntBASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SLC47A1Q96FL8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AC008568.2-201ENST00000623862 2313 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AC233263.6-201ENST00000631132 1963 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 Y_RNA.9-201ENST00000362354 101 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 RNU6-179P-201ENST00000363350 107 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 SNORD56.5-201ENST00000364281 72 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 RNU6-946P-201ENST00000383878 107 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 MIR493-201ENST00000385254 89 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 MIR454-201ENST00000390180 115 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 RN7SKP220-201ENST00000410611 288 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 BX323014.1-201ENST00000412876 237 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 ZNF90P2-204ENST00000419323 1075 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 NDUFB4P7-201ENST00000423198 363 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 USP9YP18-201ENST00000425912 695 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 RPL36AP6-201ENST00000435770 321 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 BNIP3P2-201ENST00000441221 577 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 RPS29P12-201ENST00000460178 152 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 RPL21P10-201ENST00000463521 490 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AF213884.2-201ENST00000510417 903 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 Y_RNA.693-201ENST00000516641 110 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AP001804.3-201ENST00000525146 880 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AL512360.1-201ENST00000555346 234 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AL160281.1-201ENST00000605307 311 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AP001330.5-201ENST00000607176 411 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AP001596.2-201ENST00000608410 312 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AC090132.2-201ENST00000615881 347 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 AC073346.2-201ENST00000624724 2058 ntBASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SLC47A1Q96FL8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 SNORA62.1-201ENST00000364287 154 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 RNU6-1322P-201ENST00000364309 107 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 RNU4-48P-201ENST00000365559 182 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 Y_RNA.381-201ENST00000365666 102 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 SNORA24.1-201ENST00000384401 135 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 RNU6-606P-201ENST00000384721 111 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 MIR183-201ENST00000384958 110 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 SNORD115-47-201ENST00000391226 86 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 CIR1P3-201ENST00000405137 479 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 RPL19P1-201ENST00000411635 428 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 AC091390.3-201ENST00000426478 338 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 AL590383.1-201ENST00000428602 75 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 RPL7P54-201ENST00000438336 674 ntBASIC2.94□□□□□ -1.94
SLC47A1Q96FL8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms